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SPECC1L-ADORA2A (SPECC1L-ADORA2A readthrough (NMD candidate))

Identity

Other alias-
HGNC (Hugo) SPECC1L-ADORA2A
LocusID (NCBI) 101730217
Atlas_Id 74167
Location 22q11.23  [Link to chromosome band 22q11]
Location_base_pair Starts at 24666785 and ends at 24838328 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SPECC1L-ADORA2A   49185
Cards
Entrez_Gene (NCBI)SPECC1L-ADORA2A  101730217  SPECC1L-ADORA2A readthrough (NMD candidate)
Aliases
GeneCards (Weizmann)SPECC1L-ADORA2A
Ensembl hg19 (Hinxton)ENSG00000258555 [Gene_View]  chr22:24666785-24838328 [Contig_View]  SPECC1L-ADORA2A [Vega]
Ensembl hg38 (Hinxton)ENSG00000258555 [Gene_View]  chr22:24666785-24838328 [Contig_View]  SPECC1L-ADORA2A [Vega]
ICGC DataPortalENSG00000258555
TCGA cBioPortalSPECC1L-ADORA2A
AceView (NCBI)SPECC1L-ADORA2A
Genatlas (Paris)SPECC1L-ADORA2A
WikiGenes101730217
SOURCE (Princeton)SPECC1L-ADORA2A
Genetics Home Reference (NIH)SPECC1L-ADORA2A
Genomic and cartography
GoldenPath hg19 (UCSC)SPECC1L-ADORA2A  -     chr22:24666785-24838328 +  22q11.23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SPECC1L-ADORA2A  -     22q11.23   [Description]    (hg38-Dec_2013)
EnsemblSPECC1L-ADORA2A - 22q11.23 [CytoView hg19]  SPECC1L-ADORA2A - 22q11.23 [CytoView hg38]
Mapping of homologs : NCBISPECC1L-ADORA2A [Mapview hg19]  SPECC1L-ADORA2A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB209022 GR939218 GR939229 GR939241 GR939262
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_011520 NW_004929430
Consensus coding sequences : CCDS (NCBI)SPECC1L-ADORA2A
Cluster EST : UnigeneHs.474384 [ NCBI ]
CGAP (NCI)Hs.474384
Alternative Splicing GalleryENSG00000258555
Gene ExpressionSPECC1L-ADORA2A [ NCBI-GEO ]   SPECC1L-ADORA2A [ EBI - ARRAY_EXPRESS ]   SPECC1L-ADORA2A [ SEEK ]   SPECC1L-ADORA2A [ MEM ]
Gene Expression Viewer (FireBrowse)SPECC1L-ADORA2A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101730217
GTEX Portal (Tissue expression)SPECC1L-ADORA2A
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SPECC1L-ADORA2A
DMDM Disease mutations101730217
Blocks (Seattle)SPECC1L-ADORA2A
Human Protein AtlasENSG00000258555
Protein Interaction databases
FunCoupENSG00000258555
BioGRIDSPECC1L-ADORA2A
STRING (EMBL)SPECC1L-ADORA2A
ZODIACSPECC1L-ADORA2A
Ontologies - Pathways
Huge Navigator SPECC1L-ADORA2A [HugePedia]
snp3D : Map Gene to Disease101730217
BioCentury BCIQSPECC1L-ADORA2A
ClinGenSPECC1L-ADORA2A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101730217
Clinical trialSPECC1L-ADORA2A
Miscellaneous
canSAR (ICR)SPECC1L-ADORA2A (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSPECC1L-ADORA2A
EVEXSPECC1L-ADORA2A
GoPubMedSPECC1L-ADORA2A
iHOPSPECC1L-ADORA2A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:46:28 CET 2017

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