SPTSSB (serine palmitoyltransferase small subunit B)

2014-11-01 Affiliation

Identity

HGNC

SPTSSB

LOCATION

3q26.1

LOCUSID

165679

ALIAS

ADMP,C3orf57,SSSPTB

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 165679
MIM: 610412
HGNC: 24045
Ensembl: ENSG00000196542

Variants:

dbSNP: 165679
ClinVar: 165679
TCGA: ENSG00000196542
COSMIC: SPTSSB

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000196542	ENST00000359175	Q8NFR3
ENSG00000196542	ENST00000497137	Q8NFR3
ENSG00000196542	ENST00000617024	Q6ZWB5
ENSG00000196542	ENST00000620149	Q8NFR3

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Pathways

Pathway	Source	External ID
Metabolism	REACTOME	R-HSA-1430728
Metabolism of lipids and lipoproteins	REACTOME	R-HSA-556833
Sphingolipid metabolism	REACTOME	R-HSA-428157
Sphingolipid de novo biosynthesis	REACTOME	R-HSA-1660661

References

Pubmed ID	Year	Title	Citations
15777716	2005	Molecular cloning and characterization of a novel androgen repressible gene expressed in the prostate epithelium.	3

Citation

Dessen P

SPTSSB (serine palmitoyltransferase small subunit B)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/74220/sptssb