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SPTY2D1OS (SPTY2D1 opposite strand)

Identity

Alias (NCBI)SPTY2D1-AS1
HGNC (Hugo) SPTY2D1OS
LocusID (NCBI) 100506540
Atlas_Id 80637
Location 11p15.1  [Link to chromosome band 11p15]
Location_base_pair Starts at 18599787 and ends at 18603893 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)SPTY2D1OS   44122
Cards
Entrez_Gene (NCBI)SPTY2D1OS    SPTY2D1 opposite strand
AliasesSPTY2D1-AS1
GeneCards (Weizmann)SPTY2D1OS
Ensembl hg19 (Hinxton)ENSG00000247595 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000247595 [Gene_View]  ENSG00000247595 [Sequence]  chr11:18599787-18603893 [Contig_View]  SPTY2D1OS [Vega]
ICGC DataPortalENSG00000247595
TCGA cBioPortalSPTY2D1OS
AceView (NCBI)SPTY2D1OS
Genatlas (Paris)SPTY2D1OS
SOURCE (Princeton)SPTY2D1OS
Genetics Home Reference (NIH)SPTY2D1OS
Genomic and cartography
GoldenPath hg38 (UCSC)SPTY2D1OS  -     chr11:18599787-18603893 +  11p15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SPTY2D1OS  -     11p15.1   [Description]    (hg19-Feb_2009)
GoldenPathSPTY2D1OS - 11p15.1 [CytoView hg19]  SPTY2D1OS - 11p15.1 [CytoView hg38]
ImmunoBaseENSG00000247595
genome Data Viewer NCBISPTY2D1OS [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK097654 AL137366 BQ429317
RefSeq transcript (Entrez)NM_001355570
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SPTY2D1OS
Alternative Splicing GalleryENSG00000247595
Gene ExpressionSPTY2D1OS [ NCBI-GEO ]   SPTY2D1OS [ EBI - ARRAY_EXPRESS ]   SPTY2D1OS [ SEEK ]   SPTY2D1OS [ MEM ]
Gene Expression Viewer (FireBrowse)SPTY2D1OS [ Firebrowse - Broad ]
GenevisibleExpression of SPTY2D1OS in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100506540
GTEX Portal (Tissue expression)SPTY2D1OS
Human Protein AtlasENSG00000247595-SPTY2D1OS [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SPTY2D1OS
Blocks (Seattle)SPTY2D1OS
Human Protein Atlas [tissue]ENSG00000247595-SPTY2D1OS [tissue]
Protein Interaction databases
BioGRIDSPTY2D1OS
STRING (EMBL)SPTY2D1OS
ZODIACSPTY2D1OS
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSPTY2D1OS
EVEXSPTY2D1OS
GoPubMedSPTY2D1OS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:30:21 CET 2020

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