Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SRD5A1P1 (steroid 5 alpha-reductase 1 pseudogene 1)

Identity

Alias_namesSRD5AP1
steroid-5-alpha-reductase, alpha polypeptide pseudogene 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha pseudogene)
steroid-5-alpha-reductase, alpha polypeptide 1 pseudogene 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha pseudogene)
steroid 5 alpha-reductase A1 pseudogene 1
Other alias
HGNC (Hugo) SRD5A1P1
LocusID (NCBI) 6719
Atlas_Id 74225
Location Xq27.1  [Link to chromosome band Xq27]
Location_base_pair Starts at 139446819 and ends at 139448973 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SRD5A1P1   11286
Cards
Entrez_Gene (NCBI)SRD5A1P1  6719  steroid 5 alpha-reductase 1 pseudogene 1
AliasesSRD5AP1
GeneCards (Weizmann)SRD5A1P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:139446819-139448973 [Contig_View]  SRD5A1P1 [Vega]
TCGA cBioPortalSRD5A1P1
AceView (NCBI)SRD5A1P1
Genatlas (Paris)SRD5A1P1
WikiGenes6719
SOURCE (Princeton)SRD5A1P1
Genetics Home Reference (NIH)SRD5A1P1
Genomic and cartography
GoldenPath hg38 (UCSC)SRD5A1P1  -     chrX:139446819-139448973 +  Xq27.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SRD5A1P1  -     Xq27.1   [Description]    (hg19-Feb_2009)
EnsemblSRD5A1P1 - Xq27.1 [CytoView hg19]  SRD5A1P1 - Xq27.1 [CytoView hg38]
Mapping of homologs : NCBISRD5A1P1 [Mapview hg19]  SRD5A1P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX470592
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SRD5A1P1
Cluster EST : UnigeneHs.730315 [ NCBI ]
CGAP (NCI)Hs.730315
Gene ExpressionSRD5A1P1 [ NCBI-GEO ]   SRD5A1P1 [ EBI - ARRAY_EXPRESS ]   SRD5A1P1 [ SEEK ]   SRD5A1P1 [ MEM ]
Gene Expression Viewer (FireBrowse)SRD5A1P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)6719
GTEX Portal (Tissue expression)SRD5A1P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SRD5A1P1
DMDM Disease mutations6719
Blocks (Seattle)SRD5A1P1
Protein Interaction databases
BioGRIDSRD5A1P1
STRING (EMBL)SRD5A1P1
ZODIACSRD5A1P1
Ontologies - Pathways
Huge Navigator SRD5A1P1 [HugePedia]
snp3D : Map Gene to Disease6719
BioCentury BCIQSRD5A1P1
ClinGenSRD5A1P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6719
Chemical/Pharm GKB GenePA36114
Clinical trialSRD5A1P1
Miscellaneous
canSAR (ICR)SRD5A1P1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSRD5A1P1
EVEXSRD5A1P1
GoPubMedSRD5A1P1
iHOPSRD5A1P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:00:44 CET 2017

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