Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SRD5A3-AS1 (SRD5A3 antisense RNA 1)

Identity

Alias_namesSRD5A3 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) SRD5A3-AS1
LocusID (NCBI) 100506462
Atlas_Id 74226
Location 4q12  [Link to chromosome band 4q12]
Location_base_pair Starts at 55366601 and ends at 55385580 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SRD5A3-AS1   44138
Cards
Entrez_Gene (NCBI)SRD5A3-AS1  100506462  SRD5A3 antisense RNA 1
Aliases
GeneCards (Weizmann)SRD5A3-AS1
Ensembl hg19 (Hinxton)ENSG00000249700 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249700 [Gene_View]  chr4:55366601-55385580 [Contig_View]  SRD5A3-AS1 [Vega]
ICGC DataPortalENSG00000249700
TCGA cBioPortalSRD5A3-AS1
AceView (NCBI)SRD5A3-AS1
Genatlas (Paris)SRD5A3-AS1
WikiGenes100506462
SOURCE (Princeton)SRD5A3-AS1
Genetics Home Reference (NIH)SRD5A3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SRD5A3-AS1  -     chr4:55366601-55385580 -  4q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SRD5A3-AS1  -     4q12   [Description]    (hg19-Feb_2009)
EnsemblSRD5A3-AS1 - 4q12 [CytoView hg19]  SRD5A3-AS1 - 4q12 [CytoView hg38]
Mapping of homologs : NCBISRD5A3-AS1 [Mapview hg19]  SRD5A3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC034006 BC047403 BQ574699
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SRD5A3-AS1
Cluster EST : UnigeneHs.718667 [ NCBI ]
CGAP (NCI)Hs.718667
Alternative Splicing GalleryENSG00000249700
Gene ExpressionSRD5A3-AS1 [ NCBI-GEO ]   SRD5A3-AS1 [ EBI - ARRAY_EXPRESS ]   SRD5A3-AS1 [ SEEK ]   SRD5A3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SRD5A3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506462
GTEX Portal (Tissue expression)SRD5A3-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SRD5A3-AS1
DMDM Disease mutations100506462
Blocks (Seattle)SRD5A3-AS1
Human Protein AtlasENSG00000249700
Protein Interaction databases
FunCoupENSG00000249700
BioGRIDSRD5A3-AS1
STRING (EMBL)SRD5A3-AS1
ZODIACSRD5A3-AS1
Ontologies - Pathways
Huge Navigator SRD5A3-AS1 [HugePedia]
snp3D : Map Gene to Disease100506462
BioCentury BCIQSRD5A3-AS1
ClinGenSRD5A3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506462
Clinical trialSRD5A3-AS1
Miscellaneous
canSAR (ICR)SRD5A3-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSRD5A3-AS1
EVEXSRD5A3-AS1
GoPubMedSRD5A3-AS1
iHOPSRD5A3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:56:36 CEST 2017

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