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SRGAP3-AS2 (SRGAP3 antisense RNA 2)

Identity

Other alias-
HGNC (Hugo) SRGAP3-AS2
LocusID (NCBI) 101927416
Atlas_Id 78768
Location 3p25.3  [Link to chromosome band 3p25]
Location_base_pair Starts at 9192493 and ends at 9194453 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SRGAP3-AS2   40899
Cards
Entrez_Gene (NCBI)SRGAP3-AS2  101927416  SRGAP3 antisense RNA 2
Aliases
GeneCards (Weizmann)SRGAP3-AS2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:9192493-9194453 [Contig_View]  SRGAP3-AS2 [Vega]
TCGA cBioPortalSRGAP3-AS2
AceView (NCBI)SRGAP3-AS2
Genatlas (Paris)SRGAP3-AS2
WikiGenes101927416
SOURCE (Princeton)SRGAP3-AS2
Genetics Home Reference (NIH)SRGAP3-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)SRGAP3-AS2  -     chr3:9192493-9194453 +  3p25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SRGAP3-AS2  -     3p25.3   [Description]    (hg19-Feb_2009)
EnsemblSRGAP3-AS2 - 3p25.3 [CytoView hg19]  SRGAP3-AS2 - 3p25.3 [CytoView hg38]
Mapping of homologs : NCBISRGAP3-AS2 [Mapview hg19]  SRGAP3-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC041457 DB198681
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SRGAP3-AS2
Cluster EST : UnigeneHs.742235 [ NCBI ]
CGAP (NCI)Hs.742235
Gene ExpressionSRGAP3-AS2 [ NCBI-GEO ]   SRGAP3-AS2 [ EBI - ARRAY_EXPRESS ]   SRGAP3-AS2 [ SEEK ]   SRGAP3-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)SRGAP3-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927416
GTEX Portal (Tissue expression)SRGAP3-AS2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SRGAP3-AS2
DMDM Disease mutations101927416
Blocks (Seattle)SRGAP3-AS2
Protein Interaction databases
BioGRIDSRGAP3-AS2
STRING (EMBL)SRGAP3-AS2
ZODIACSRGAP3-AS2
Ontologies - Pathways
Huge Navigator SRGAP3-AS2 [HugePedia]
snp3D : Map Gene to Disease101927416
BioCentury BCIQSRGAP3-AS2
ClinGenSRGAP3-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927416
Clinical trialSRGAP3-AS2
Miscellaneous
canSAR (ICR)SRGAP3-AS2 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSRGAP3-AS2
EVEXSRGAP3-AS2
GoPubMedSRGAP3-AS2
iHOPSRGAP3-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:31:00 CET 2017

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