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SRGAP3-AS4 (SRGAP3 antisense RNA 4)

Identity

Alias_namesSRGAP3 antisense RNA 4 (non-protein coding)
Other alias-
HGNC (Hugo) SRGAP3-AS4
LocusID (NCBI) 101927440
Atlas_Id 79858
Location 3p25.3  [Link to chromosome band 3p25]
Location_base_pair Starts at 9249756 and ends at 9257507 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SRGAP3-AS4   42434
Cards
Entrez_Gene (NCBI)SRGAP3-AS4  101927440  SRGAP3 antisense RNA 4
Aliases
GeneCards (Weizmann)SRGAP3-AS4
Ensembl hg19 (Hinxton)ENSG00000235830 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235830 [Gene_View]  ENSG00000235830 [Sequence]  chr3:9249756-9257507 [Contig_View]  SRGAP3-AS4 [Vega]
ICGC DataPortalENSG00000235830
TCGA cBioPortalSRGAP3-AS4
AceView (NCBI)SRGAP3-AS4
Genatlas (Paris)SRGAP3-AS4
WikiGenes101927440
SOURCE (Princeton)SRGAP3-AS4
Genetics Home Reference (NIH)SRGAP3-AS4
Genomic and cartography
GoldenPath hg38 (UCSC)SRGAP3-AS4  -     chr3:9249756-9257507 +  3p25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SRGAP3-AS4  -     3p25.3   [Description]    (hg19-Feb_2009)
EnsemblSRGAP3-AS4 - 3p25.3 [CytoView hg19]  SRGAP3-AS4 - 3p25.3 [CytoView hg38]
Mapping of homologs : NCBISRGAP3-AS4 [Mapview hg19]  SRGAP3-AS4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW339471
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SRGAP3-AS4
Alternative Splicing GalleryENSG00000235830
Gene ExpressionSRGAP3-AS4 [ NCBI-GEO ]   SRGAP3-AS4 [ EBI - ARRAY_EXPRESS ]   SRGAP3-AS4 [ SEEK ]   SRGAP3-AS4 [ MEM ]
Gene Expression Viewer (FireBrowse)SRGAP3-AS4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927440
GTEX Portal (Tissue expression)SRGAP3-AS4
Human Protein AtlasENSG00000235830-SRGAP3-AS4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SRGAP3-AS4
DMDM Disease mutations101927440
Blocks (Seattle)SRGAP3-AS4
Human Protein Atlas [tissue]ENSG00000235830-SRGAP3-AS4 [tissue]
Protein Interaction databases
FunCoupENSG00000235830
BioGRIDSRGAP3-AS4
STRING (EMBL)SRGAP3-AS4
ZODIACSRGAP3-AS4
Ontologies - Pathways
Huge Navigator SRGAP3-AS4 [HugePedia]
snp3D : Map Gene to Disease101927440
BioCentury BCIQSRGAP3-AS4
ClinGenSRGAP3-AS4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927440
Clinical trialSRGAP3-AS4
Miscellaneous
canSAR (ICR)SRGAP3-AS4 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineSRGAP3-AS4
EVEXSRGAP3-AS4
GoPubMedSRGAP3-AS4
iHOPSRGAP3-AS4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:33:14 CEST 2018

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