Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SRPRA (SRP receptor alpha subunit)

Identity

Alias_namesSRPR
signal recognition particle receptor (docking protein)
Alias_symbol (synonym)SRP-alpha
Sralpha
SR-alpha
Other aliasDP
HGNC (Hugo) SRPRA
LocusID (NCBI) 6734
Atlas_Id 78019
Location 11q24.2  [Link to chromosome band 11q24]
Location_base_pair Starts at 126132814 and ends at 126138877 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
SNHG1 (11q12.3) / SRPRA (11q24.2)SRPRA (11q24.2) / SRPRA (11q24.2)USH1C (11p15.1) / SRPRA (11q24.2)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SRPRA   11307
Cards
Entrez_Gene (NCBI)SRPRA  6734  SRP receptor alpha subunit
AliasesDP; SRPR; Sralpha
GeneCards (Weizmann)SRPRA
Ensembl hg19 (Hinxton)ENSG00000182934 [Gene_View]  chr11:126132814-126138877 [Contig_View]  SRPRA [Vega]
Ensembl hg38 (Hinxton)ENSG00000182934 [Gene_View]  chr11:126132814-126138877 [Contig_View]  SRPRA [Vega]
ICGC DataPortalENSG00000182934
TCGA cBioPortalSRPRA
AceView (NCBI)SRPRA
Genatlas (Paris)SRPRA
WikiGenes6734
SOURCE (Princeton)SRPRA
Genetics Home Reference (NIH)SRPRA
Genomic and cartography
GoldenPath hg19 (UCSC)SRPRA  -     chr11:126132814-126138877 -  11q24.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SRPRA  -     11q24.2   [Description]    (hg38-Dec_2013)
EnsemblSRPRA - 11q24.2 [CytoView hg19]  SRPRA - 11q24.2 [CytoView hg38]
Mapping of homologs : NCBISRPRA [Mapview hg19]  SRPRA [Mapview hg38]
OMIM182180   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001177842 NM_003139
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_033899 NW_004929381
Consensus coding sequences : CCDS (NCBI)SRPRA
Cluster EST : UnigeneHs.368376 [ NCBI ]
CGAP (NCI)Hs.368376
Alternative Splicing GalleryENSG00000182934
Gene ExpressionSRPRA [ NCBI-GEO ]   SRPRA [ EBI - ARRAY_EXPRESS ]   SRPRA [ SEEK ]   SRPRA [ MEM ]
Gene Expression Viewer (FireBrowse)SRPRA [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)6734
GTEX Portal (Tissue expression)SRPRA
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SRPRA
DMDM Disease mutations6734
Blocks (Seattle)SRPRA
Human Protein AtlasENSG00000182934
HPRD01645
IPIIPI00385267   IPI00964088   
Protein Interaction databases
FunCoupENSG00000182934
BioGRIDSRPRA
STRING (EMBL)SRPRA
ZODIACSRPRA
Ontologies - Pathways
Huge Navigator SRPRA [HugePedia]
snp3D : Map Gene to Disease6734
BioCentury BCIQSRPRA
ClinGenSRPRA
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6734
Chemical/Pharm GKB GenePA36131
Clinical trialSRPRA
Miscellaneous
canSAR (ICR)SRPRA (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSRPRA
EVEXSRPRA
GoPubMedSRPRA
iHOPSRPRA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:46:42 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.