Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SS18L2P1 (SS18 like 2 pseudogene 1)

Identity

Alias_namessynovial sarcoma translocation gene on chromosome 18-like 2 pseudogene 1
Other alias-
HGNC (Hugo) SS18L2P1
LocusID (NCBI) 646213
Atlas_Id 51902
Location 10p11.21  [Link to chromosome band 10p11]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SS18L2P1   44965
Cards
Entrez_Gene (NCBI)SS18L2P1  646213  SS18 like 2 pseudogene 1
Aliases
GeneCards (Weizmann)SS18L2P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  SS18L2P1 [Vega]
TCGA cBioPortalSS18L2P1
AceView (NCBI)SS18L2P1
Genatlas (Paris)SS18L2P1
WikiGenes646213
SOURCE (Princeton)SS18L2P1
Genetics Home Reference (NIH)SS18L2P1
Genomic and cartography
GoldenPath hg38 (UCSC)SS18L2P1  -  
GoldenPath hg19 (UCSC)SS18L2P1  -  
EnsemblSS18L2P1 - [CytoView hg19]  SS18L2P1 - [CytoView hg38]
Mapping of homologs : NCBISS18L2P1 [Mapview hg19]  SS18L2P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SS18L2P1
Gene ExpressionSS18L2P1 [ NCBI-GEO ]   SS18L2P1 [ EBI - ARRAY_EXPRESS ]   SS18L2P1 [ SEEK ]   SS18L2P1 [ MEM ]
Gene Expression Viewer (FireBrowse)SS18L2P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)646213
GTEX Portal (Tissue expression)SS18L2P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SS18L2P1
DMDM Disease mutations646213
Blocks (Seattle)SS18L2P1
Protein Interaction databases
BioGRIDSS18L2P1
STRING (EMBL)SS18L2P1
ZODIACSS18L2P1
Ontologies - Pathways
Huge Navigator SS18L2P1 [HugePedia]
snp3D : Map Gene to Disease646213
BioCentury BCIQSS18L2P1
ClinGenSS18L2P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD646213
Clinical trialSS18L2P1
Miscellaneous
canSAR (ICR)SS18L2P1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineSS18L2P1
EVEXSS18L2P1
GoPubMedSS18L2P1
iHOPSS18L2P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:36:35 CET 2017

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