Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SSSCA1-AS1 (SSSCA1 antisense RNA 1 (head to head))

Identity

Other alias-
HGNC (Hugo) SSSCA1-AS1
LocusID (NCBI) 254100
Atlas_Id 74263
Location 11q13.1  [Link to chromosome band 11q13]
Location_base_pair Starts at 65569220 and ends at 65570413 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SSSCA1-AS1   27384
Cards
Entrez_Gene (NCBI)SSSCA1-AS1  254100  SSSCA1 antisense RNA 1 (head to head)
Aliases
GeneCards (Weizmann)SSSCA1-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:65569220-65570413 [Contig_View]  SSSCA1-AS1 [Vega]
TCGA cBioPortalSSSCA1-AS1
AceView (NCBI)SSSCA1-AS1
Genatlas (Paris)SSSCA1-AS1
WikiGenes254100
SOURCE (Princeton)SSSCA1-AS1
Genetics Home Reference (NIH)SSSCA1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SSSCA1-AS1  -     chr11:65569220-65570413 -  11q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SSSCA1-AS1  -     11q13.1   [Description]    (hg19-Feb_2009)
EnsemblSSSCA1-AS1 - 11q13.1 [CytoView hg19]  SSSCA1-AS1 - 11q13.1 [CytoView hg38]
Mapping of homologs : NCBISSSCA1-AS1 [Mapview hg19]  SSSCA1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF085877 AK057616 DA695100
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SSSCA1-AS1
Cluster EST : UnigeneHs.595927 [ NCBI ]
CGAP (NCI)Hs.595927
Gene ExpressionSSSCA1-AS1 [ NCBI-GEO ]   SSSCA1-AS1 [ EBI - ARRAY_EXPRESS ]   SSSCA1-AS1 [ SEEK ]   SSSCA1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SSSCA1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)254100
GTEX Portal (Tissue expression)SSSCA1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SSSCA1-AS1
DMDM Disease mutations254100
Blocks (Seattle)SSSCA1-AS1
Protein Interaction databases
BioGRIDSSSCA1-AS1
STRING (EMBL)SSSCA1-AS1
ZODIACSSSCA1-AS1
Ontologies - Pathways
Huge Navigator SSSCA1-AS1 [HugePedia]
snp3D : Map Gene to Disease254100
BioCentury BCIQSSSCA1-AS1
ClinGenSSSCA1-AS1
Clinical trials, drug3, vherapy
Chemical/Protein Interactions : CTD254100
Clinical trialSSSCA1-AS1
Miscellaneous
canSAR (ICR)SSSCA1-AS1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSSSCA1-AS1
EVEXSSSCA1-AS1
GoPubMedSSSCA1-AS1
iHOPSSSCA1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:40:32 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.