Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SSX6 (-)

Identity

Alias_namesSSXP2
SSX family pseudogene 2
synovial sarcoma, X breakpoint 6
synovial sarcoma, X breakpoint 6 (pseudogene)
Alias_symbol (synonym)psiSSX2
SSX6P
Other alias-
HGNC (Hugo) -
LocusID (NCBI) 280657
Atlas_Id 42411
Location -  [Link to chromosome band ]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)SSX6  280657  -
Aliases
GeneCards (Weizmann)SSX6
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  SSX6 [Vega]
TCGA cBioPortalSSX6
AceView (NCBI)SSX6
Genatlas (Paris)SSX6
WikiGenes280657
SOURCE (Princeton)SSX6
Genetics Home Reference (NIH)SSX6
Genomic and cartography
GoldenPath hg38 (UCSC)SSX6  -  
GoldenPath hg19 (UCSC)SSX6  -  
EnsemblSSX6 - [CytoView hg19]  SSX6 - [CytoView hg38]
Mapping of homologs : NCBISSX6 [Mapview hg19]  SSX6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SSX6
Gene ExpressionSSX6 [ NCBI-GEO ]   SSX6 [ EBI - ARRAY_EXPRESS ]   SSX6 [ SEEK ]   SSX6 [ MEM ]
Gene Expression Viewer (FireBrowse)SSX6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)280657
GTEX Portal (Tissue expression)SSX6
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SSX6
DMDM Disease mutations280657
Blocks (Seattle)SSX6
HPRD18109
Protein Interaction databases
BioGRIDSSX6
STRING (EMBL)SSX6
ZODIACSSX6
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease280657
BioCentury BCIQSSX6
ClinGenSSX6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD280657
Clinical trialSSX6
Miscellaneous
canSAR (ICR)SSX6 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineSSX6
EVEXSSX6
GoPubMedSSX6
iHOPSSX6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Aug 27 11:55:05 CEST 2018

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