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ST3GAL3 (ST3 beta-galactoside alpha-2,3-sialyltransferase 3)

Identity

Alias (NCBI)DEE15
EIEE15
MRT12
SIAT6
ST3GALII
ST3Gal III
ST3GalIII
ST3N
HGNC (Hugo) ST3GAL3
HGNC Alias nameST3Gal III
 N-acetyllactosaminide alpha-2,3-sialyltransferase
HGNC Previous nameSIAT6
 MRT12
HGNC Previous namesialyltransferase 6 (N-acetyllactosaminide alpha 2,3-sialyltransferase)
 mental retardation, non-syndromic, autosomal recessive, 12
LocusID (NCBI) 6487
Atlas_Id 46012
Location 1p34.1  [Link to chromosome band 1p34]
Location_base_pair Starts at 43707536 and ends at 43931159 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
KAZN (1p36.21) / ST3GAL3 (1p34.1)ST3GAL3 (1p34.1) / SSBP3 (1p32.3)ST3GAL3 (1p34.1) / TAL1 (1p33)
ST3GAL3 (1p34.1) / TMC8 (17q25.3)KAZN 1p36.21 / ST3GAL3 1p34.1ST3GAL3 1p34.1 / TAL1 1p33

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)ST3GAL3   10866
Cards
Entrez_Gene (NCBI)ST3GAL3    ST3 beta-galactoside alpha-2,3-sialyltransferase 3
AliasesDEE15; EIEE15; MRT12; SIAT6; 
ST3GALII; ST3Gal; ST3GalIII; ST3N
GeneCards (Weizmann)ST3GAL3
Ensembl hg19 (Hinxton)ENSG00000126091 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000126091 [Gene_View]  ENSG00000126091 [Sequence]  chr1:43707536-43931159 [Contig_View]  ST3GAL3 [Vega]
ICGC DataPortalENSG00000126091
TCGA cBioPortalST3GAL3
AceView (NCBI)ST3GAL3
Genatlas (Paris)ST3GAL3
SOURCE (Princeton)ST3GAL3
Genetics Home Reference (NIH)ST3GAL3
Genomic and cartography
GoldenPath hg38 (UCSC)ST3GAL3  -     chr1:43707536-43931159 +  1p34.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ST3GAL3  -     1p34.1   [Description]    (hg19-Feb_2009)
GoldenPathST3GAL3 - 1p34.1 [CytoView hg19]  ST3GAL3 - 1p34.1 [CytoView hg38]
ImmunoBaseENSG00000126091
Genome Data Viewer NCBIST3GAL3 [Mapview hg19]  
OMIM606494   611090   615006   
Gene and transcription
Genbank (Entrez)AA478788 AF425851 AF425852 AF425853 AF425854
RefSeq transcript (Entrez)NM_001270459 NM_001270460 NM_001270461 NM_001270462 NM_001270463 NM_001270464 NM_001270465 NM_001270466 NM_001350619 NM_001350620 NM_001350621 NM_001363573 NM_006279 NM_174963 NM_174964 NM_174965 NM_174966 NM_174967 NM_174968 NM_174969 NM_174970 NM_174971 NM_174972
Consensus coding sequences : CCDS (NCBI)ST3GAL3
Gene ExpressionST3GAL3 [ NCBI-GEO ]   ST3GAL3 [ EBI - ARRAY_EXPRESS ]   ST3GAL3 [ SEEK ]   ST3GAL3 [ MEM ]
Gene Expression Viewer (FireBrowse)ST3GAL3 [ Firebrowse - Broad ]
GenevisibleExpression of ST3GAL3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6487
GTEX Portal (Tissue expression)ST3GAL3
Human Protein AtlasENSG00000126091-ST3GAL3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ST3GAL3
Human Protein Atlas [tissue]ENSG00000126091-ST3GAL3 [tissue]
HPRD05930
Protein Interaction databases
BioGRIDST3GAL3
STRING (EMBL)ST3GAL3
ZODIACST3GAL3
Ontologies - Pathways
Litterature
PubMed38 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXST3GAL3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:33:25 CEST 2021

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