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ST3GAL6-AS1 (ST3GAL6 antisense RNA 1)

Identity

Alias_namesST3GAL6 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) ST3GAL6-AS1
LocusID (NCBI) 100874207
Atlas_Id 74269
Location 3q12.1  [Link to chromosome band 3q12]
Location_base_pair Starts at 98714333 and ends at 98732651 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ST3GAL6-AS1   40828
Cards
Entrez_Gene (NCBI)ST3GAL6-AS1  100874207  ST3GAL6 antisense RNA 1
Aliases
GeneCards (Weizmann)ST3GAL6-AS1
Ensembl hg19 (Hinxton)ENSG00000239445 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000239445 [Gene_View]  chr3:98714333-98732651 [Contig_View]  ST3GAL6-AS1 [Vega]
ICGC DataPortalENSG00000239445
TCGA cBioPortalST3GAL6-AS1
AceView (NCBI)ST3GAL6-AS1
Genatlas (Paris)ST3GAL6-AS1
WikiGenes100874207
SOURCE (Princeton)ST3GAL6-AS1
Genetics Home Reference (NIH)ST3GAL6-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ST3GAL6-AS1  -     chr3:98714333-98732651 -  3q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ST3GAL6-AS1  -     3q12.1   [Description]    (hg19-Feb_2009)
EnsemblST3GAL6-AS1 - 3q12.1 [CytoView hg19]  ST3GAL6-AS1 - 3q12.1 [CytoView hg38]
Mapping of homologs : NCBIST3GAL6-AS1 [Mapview hg19]  ST3GAL6-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG821580 CA310342
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ST3GAL6-AS1
Cluster EST : UnigeneHs.633553 [ NCBI ]
CGAP (NCI)Hs.633553
Alternative Splicing GalleryENSG00000239445
Gene ExpressionST3GAL6-AS1 [ NCBI-GEO ]   ST3GAL6-AS1 [ EBI - ARRAY_EXPRESS ]   ST3GAL6-AS1 [ SEEK ]   ST3GAL6-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ST3GAL6-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874207
GTEX Portal (Tissue expression)ST3GAL6-AS1
Human Protein AtlasENSG00000239445-ST3GAL6-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ST3GAL6-AS1
DMDM Disease mutations100874207
Blocks (Seattle)ST3GAL6-AS1
Human Protein Atlas [tissue]ENSG00000239445-ST3GAL6-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000239445
BioGRIDST3GAL6-AS1
STRING (EMBL)ST3GAL6-AS1
ZODIACST3GAL6-AS1
Ontologies - Pathways
Huge Navigator ST3GAL6-AS1 [HugePedia]
snp3D : Map Gene to Disease100874207
BioCentury BCIQST3GAL6-AS1
ClinGenST3GAL6-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874207
Clinical trialST3GAL6-AS1
Miscellaneous
canSAR (ICR)ST3GAL6-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineST3GAL6-AS1
EVEXST3GAL6-AS1
GoPubMedST3GAL6-AS1
iHOPST3GAL6-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:31:07 CET 2017

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