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ST7-AS1 (ST7 antisense RNA 1)

Identity

Alias_namesST7OT1
ST7 overlapping transcript 1 (antisense non-coding RNA)
ST7 overlapping transcript 1 (non-protein coding)
ST7 antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)ST7AS1
Other alias
HGNC (Hugo) ST7-AS1
LocusID (NCBI) 93653
Atlas_Id 74276
Location 7q31.2  [Link to chromosome band 7q31]
Location_base_pair Starts at 116952447 and ends at 116954334 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
RPL7A (9q34.2) / ST7-AS1 (7q31.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ST7-AS1   16000
Cards
Entrez_Gene (NCBI)ST7-AS1  93653  ST7 antisense RNA 1
AliasesST7AS1; ST7OT1
GeneCards (Weizmann)ST7-AS1
Ensembl hg19 (Hinxton)ENSG00000227199 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227199 [Gene_View]  chr7:116952447-116954334 [Contig_View]  ST7-AS1 [Vega]
ICGC DataPortalENSG00000227199
TCGA cBioPortalST7-AS1
AceView (NCBI)ST7-AS1
Genatlas (Paris)ST7-AS1
WikiGenes93653
SOURCE (Princeton)ST7-AS1
Genetics Home Reference (NIH)ST7-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ST7-AS1  -     chr7:116952447-116954334 -  7q31.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ST7-AS1  -     7q31.2   [Description]    (hg19-Feb_2009)
EnsemblST7-AS1 - 7q31.2 [CytoView hg19]  ST7-AS1 - 7q31.2 [CytoView hg38]
Mapping of homologs : NCBIST7-AS1 [Mapview hg19]  ST7-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF400039
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ST7-AS1
Cluster EST : UnigeneHs.597516 [ NCBI ]
CGAP (NCI)Hs.597516
Alternative Splicing GalleryENSG00000227199
Gene ExpressionST7-AS1 [ NCBI-GEO ]   ST7-AS1 [ EBI - ARRAY_EXPRESS ]   ST7-AS1 [ SEEK ]   ST7-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ST7-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)93653
GTEX Portal (Tissue expression)ST7-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ST7-AS1
DMDM Disease mutations93653
Blocks (Seattle)ST7-AS1
Human Protein AtlasENSG00000227199
Protein Interaction databases
FunCoupENSG00000227199
BioGRIDST7-AS1
STRING (EMBL)ST7-AS1
ZODIACST7-AS1
Ontologies - Pathways
Huge Navigator ST7-AS1 [HugePedia]
snp3D : Map Gene to Disease93653
BioCentury BCIQST7-AS1
ClinGenST7-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD93653
Chemical/Pharm GKB GenePA38080
Clinical trialST7-AS1
Miscellaneous
canSAR (ICR)ST7-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineST7-AS1
EVEXST7-AS1
GoPubMedST7-AS1
iHOPST7-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:40:34 CEST 2017

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