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ST7-OT4 (ST7 overlapping transcript 4)

Identity

Alias_namesST7OT4
ST7 overlapping transcript 4 (non-protein coding)
Alias_symbol (synonym)NCRNA00042
Other alias
HGNC (Hugo) ST7-OT4
LocusID (NCBI) 338069
Atlas_Id 74279
Location 7q31.2  [Link to chromosome band 7q31]
Location_base_pair Starts at 116953848 and ends at 116959817 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ST7-OT4 (7q31.2) / ASZ1 (7q31.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  ST7-OT4/ASZ1 (7q31)


External links

Nomenclature
HGNC (Hugo)ST7-OT4   18835
Cards
Entrez_Gene (NCBI)ST7-OT4  338069  ST7 overlapping transcript 4
AliasesNCRNA00042; ST7OT4
GeneCards (Weizmann)ST7-OT4
Ensembl hg19 (Hinxton)ENSG00000214188 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214188 [Gene_View]  ENSG00000214188 [Sequence]  chr7:116953848-116959817 [Contig_View]  ST7-OT4 [Vega]
ICGC DataPortalENSG00000214188
TCGA cBioPortalST7-OT4
AceView (NCBI)ST7-OT4
Genatlas (Paris)ST7-OT4
WikiGenes338069
SOURCE (Princeton)ST7-OT4
Genetics Home Reference (NIH)ST7-OT4
Genomic and cartography
GoldenPath hg38 (UCSC)ST7-OT4  -     chr7:116953848-116959817 +  7q31.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ST7-OT4  -     7q31.2   [Description]    (hg19-Feb_2009)
GoldenPathST7-OT4 - 7q31.2 [CytoView hg19]  ST7-OT4 - 7q31.2 [CytoView hg38]
ImmunoBaseENSG00000214188
genome Data Viewer NCBIST7-OT4 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC043268
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ST7-OT4
Alternative Splicing GalleryENSG00000214188
Gene ExpressionST7-OT4 [ NCBI-GEO ]   ST7-OT4 [ EBI - ARRAY_EXPRESS ]   ST7-OT4 [ SEEK ]   ST7-OT4 [ MEM ]
Gene Expression Viewer (FireBrowse)ST7-OT4 [ Firebrowse - Broad ]
GenevisibleExpression of ST7-OT4 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)338069
GTEX Portal (Tissue expression)ST7-OT4
Human Protein AtlasENSG00000214188-ST7-OT4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ST7-OT4
DMDM Disease mutations338069
Blocks (Seattle)ST7-OT4
Human Protein Atlas [tissue]ENSG00000214188-ST7-OT4 [tissue]
Protein Interaction databases
FunCoupENSG00000214188
BioGRIDST7-OT4
STRING (EMBL)ST7-OT4
ZODIACST7-OT4
Ontologies - Pathways
Huge Navigator ST7-OT4 [HugePedia]
snp3D : Map Gene to Disease338069
BioCentury BCIQST7-OT4
ClinGenST7-OT4
Clinical trials, drugs, therapy
Protein Interactions : CTD338069
Pharm GKB GenePA134980990
Clinical trialST7-OT4
Miscellaneous
canSAR (ICR)ST7-OT4 (select the gene name)
HarmonizomeST7-OT4
DataMed IndexST7-OT4
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineST7-OT4
EVEXST7-OT4
GoPubMedST7-OT4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Jul 10 20:39:33 CEST 2020

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