Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ST7-OT4 (ST7 overlapping transcript 4)

Identity

Alias_namesST7OT4
ST7 overlapping transcript 4 (non-protein coding)
Alias_symbol (synonym)NCRNA00042
Other alias
HGNC (Hugo) ST7-OT4
LocusID (NCBI) 338069
Atlas_Id 74279
Location 7q31.2  [Link to chromosome band 7q31]
Location_base_pair Starts at 116593953 and ends at 116599867 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ST7-OT4 (7q31.2) / ASZ1 (7q31.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ST7-OT4   18835
Cards
Entrez_Gene (NCBI)ST7-OT4  338069  ST7 overlapping transcript 4
AliasesNCRNA00042; ST7OT4
GeneCards (Weizmann)ST7-OT4
Ensembl hg19 (Hinxton) [Gene_View]  chr7:116593953-116599867 [Contig_View]  ST7-OT4 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:116593953-116599867 [Contig_View]  ST7-OT4 [Vega]
TCGA cBioPortalST7-OT4
AceView (NCBI)ST7-OT4
Genatlas (Paris)ST7-OT4
WikiGenes338069
SOURCE (Princeton)ST7-OT4
Genetics Home Reference (NIH)ST7-OT4
Genomic and cartography
GoldenPath hg19 (UCSC)ST7-OT4  -     chr7:116593953-116599867 +  7q31.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ST7-OT4  -     7q31.2   [Description]    (hg38-Dec_2013)
EnsemblST7-OT4 - 7q31.2 [CytoView hg19]  ST7-OT4 - 7q31.2 [CytoView hg38]
Mapping of homologs : NCBIST7-OT4 [Mapview hg19]  ST7-OT4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043268 LN608154 LN608155 LN608156 LN608157
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929332
Consensus coding sequences : CCDS (NCBI)ST7-OT4
Cluster EST : UnigeneHs.662742 [ NCBI ]
CGAP (NCI)Hs.662742
Gene ExpressionST7-OT4 [ NCBI-GEO ]   ST7-OT4 [ EBI - ARRAY_EXPRESS ]   ST7-OT4 [ SEEK ]   ST7-OT4 [ MEM ]
Gene Expression Viewer (FireBrowse)ST7-OT4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)338069
GTEX Portal (Tissue expression)ST7-OT4
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ST7-OT4
DMDM Disease mutations338069
Blocks (Seattle)ST7-OT4
Protein Interaction databases
BioGRIDST7-OT4
STRING (EMBL)ST7-OT4
ZODIACST7-OT4
Ontologies - Pathways
Huge Navigator ST7-OT4 [HugePedia]
snp3D : Map Gene to Disease338069
BioCentury BCIQST7-OT4
ClinGenST7-OT4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD338069
Chemical/Pharm GKB GenePA134980990
Clinical trialST7-OT4
Miscellaneous
canSAR (ICR)ST7-OT4 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineST7-OT4
EVEXST7-OT4
GoPubMedST7-OT4
iHOPST7-OT4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:46:50 CET 2017

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