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ST7 (suppression of tumorigenicity 7)

Identity

Other namesETS7q
FAM4A
FAM4A1
HELG
RAY1
SEN4
TSG7
HGNC (Hugo) ST7
LocusID (NCBI) 7982
Location 7q31.2
Location_base_pair Starts at 116593381 and ends at 116870075 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ST7   11351
Cards
Entrez_Gene (NCBI)ST7  7982  suppression of tumorigenicity 7
GeneCards (Weizmann)ST7
Ensembl (Hinxton)ENSG00000004866 [Gene_View]  chr7:116593381-116870075 [Contig_View]  ST7 [Vega]
ICGC DataPortalENSG00000004866
AceView (NCBI)ST7
Genatlas (Paris)ST7
WikiGenes7982
SOURCE (Princeton)NM_018412 NM_021908
Genomic and cartography
GoldenPath (UCSC)ST7  -  7q31.2   chr7:116593381-116870075 +  7q31.2   [Description]    (hg19-Feb_2009)
EnsemblST7 - 7q31.2 [CytoView]
Mapping of homologs : NCBIST7 [Mapview]
OMIM600833   
Gene and transcription
Genbank (Entrez)AF234882 AF234883 AF415174 AJ277291 AK093212
RefSeq transcript (Entrez)NM_018412 NM_021908
RefSeq genomic (Entrez)AC_000139 NC_000007 NC_018918 NT_007933 NW_001839071 NW_004929332
Consensus coding sequences : CCDS (NCBI)ST7
Cluster EST : UnigeneHs.368131 [ NCBI ]
CGAP (NCI)Hs.368131
Alternative Splicing : Fast-db (Paris)GSHG0027666
Alternative Splicing GalleryENSG00000004866
Gene ExpressionST7 [ NCBI-GEO ]     ST7 [ SEEK ]   ST7 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NRC1 (Uniprot)
NextProtQ9NRC1  [Medical]
With graphics : InterProQ9NRC1
Splice isoforms : SwissVarQ9NRC1 (Swissvar)
Domains : Interpro (EBI)ST7    TPR-like_helical   
Related proteins : CluSTrQ9NRC1
Domain families : Pfam (Sanger)ST7 (PF04184)   
Domain families : Pfam (NCBI)pfam04184   
DMDM Disease mutations7982
Blocks (Seattle)Q9NRC1
Human Protein AtlasENSG00000004866
Peptide AtlasQ9NRC1
HPRD09015
IPIIPI00030166   IPI00299760   IPI00895813   IPI00657755   IPI00922544   IPI00658129   IPI00902931   IPI00005806   IPI00657897   IPI00657867   IPI00852882   IPI00852683   IPI00852755   IPI00853616   IPI00879078   IPI00878915   IPI00878525   IPI00894453   IPI00893202   IPI00925432   IPI01012865   IPI00946449   IPI01011888   
Protein Interaction databases
DIP (DOE-UCLA)Q9NRC1
IntAct (EBI)Q9NRC1
FunCoupENSG00000004866
BioGRIDST7
InParanoidQ9NRC1
Interologous Interaction database Q9NRC1
IntegromeDBST7
STRING (EMBL)ST7
Ontologies - Pathways
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
Protein Interaction DatabaseST7
Wikipedia pathwaysST7
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)ST7
SNP (GeneSNP Utah)ST7
SNP : HGBaseST7
Genetic variants : HAPMAPST7
1000_GenomesST7 
ICGC programENSG00000004866 
CONAN: Copy Number AnalysisST7 
Somatic Mutations in Cancer : COSMICST7 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
Mutations and Diseases : HGMDST7
OMIM600833   
MedgenST7
GENETestsST7
Disease Genetic AssociationST7
Huge Navigator ST7 [HugePedia]  ST7 [HugeCancerGEM]
Genomic VariantsST7  ST7 [DGVbeta]
Exome VariantST7
dbVarST7
ClinVarST7
snp3D : Map Gene to Disease7982
General knowledge
Homologs : HomoloGeneST7
Homology/Alignments : Family Browser (UCSC)ST7
Phylogenetic Trees/Animal Genes : TreeFamST7
Chemical/Protein Interactions : CTD7982
Chemical/Pharm GKB GenePA36173
Clinical trialST7
Cancer Resource (Charite)ENSG00000004866
Other databases
Probes
Litterature
PubMed33 Pubmed reference(s) in Entrez
CoreMineST7
iHOPST7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 13 13:19:26 CEST 2014

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