Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

STAG3L5P-PVRIG2P-PILRB (STAG3L5P-PVRIG2P-PILRB readthrough)

Identity

Other aliasLOC101735302-LOC101752334-PILRB
HGNC (Hugo) STAG3L5P-PVRIG2P-PILRB
LocusID (NCBI) 101752399
Atlas_Id 74289
Location 7q22.1  [Link to chromosome band 7q22]
Location_base_pair Starts at 100336065 and ends at 100367831 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)STAG3L5P-PVRIG2P-PILRB   48898
Cards
Entrez_Gene (NCBI)STAG3L5P-PVRIG2P-PILRB  101752399  STAG3L5P-PVRIG2P-PILRB readthrough
AliasesLOC101735302-LOC101752334-PILRB
GeneCards (Weizmann)STAG3L5P-PVRIG2P-PILRB
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:100336065-100367831 [Contig_View]  STAG3L5P-PVRIG2P-PILRB [Vega]
TCGA cBioPortalSTAG3L5P-PVRIG2P-PILRB
AceView (NCBI)STAG3L5P-PVRIG2P-PILRB
Genatlas (Paris)STAG3L5P-PVRIG2P-PILRB
WikiGenes101752399
SOURCE (Princeton)STAG3L5P-PVRIG2P-PILRB
Genetics Home Reference (NIH)STAG3L5P-PVRIG2P-PILRB
Genomic and cartography
GoldenPath hg38 (UCSC)STAG3L5P-PVRIG2P-PILRB  -     chr7:100336065-100367831 +  7q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)STAG3L5P-PVRIG2P-PILRB  -     7q22.1   [Description]    (hg19-Feb_2009)
EnsemblSTAG3L5P-PVRIG2P-PILRB - 7q22.1 [CytoView hg19]  STAG3L5P-PVRIG2P-PILRB - 7q22.1 [CytoView hg38]
Mapping of homologs : NCBISTAG3L5P-PVRIG2P-PILRB [Mapview hg19]  STAG3L5P-PVRIG2P-PILRB [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA908333 AF217981 AJ400846 AK056412 AK074039
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)STAG3L5P-PVRIG2P-PILRB
Cluster EST : UnigeneHs.632314 [ NCBI ]
CGAP (NCI)Hs.632314
Gene ExpressionSTAG3L5P-PVRIG2P-PILRB [ NCBI-GEO ]   STAG3L5P-PVRIG2P-PILRB [ EBI - ARRAY_EXPRESS ]   STAG3L5P-PVRIG2P-PILRB [ SEEK ]   STAG3L5P-PVRIG2P-PILRB [ MEM ]
Gene Expression Viewer (FireBrowse)STAG3L5P-PVRIG2P-PILRB [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101752399
GTEX Portal (Tissue expression)STAG3L5P-PVRIG2P-PILRB
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)STAG3L5P-PVRIG2P-PILRB
DMDM Disease mutations101752399
Blocks (Seattle)STAG3L5P-PVRIG2P-PILRB
Protein Interaction databases
BioGRIDSTAG3L5P-PVRIG2P-PILRB
STRING (EMBL)STAG3L5P-PVRIG2P-PILRB
ZODIACSTAG3L5P-PVRIG2P-PILRB
Ontologies - Pathways
Huge Navigator STAG3L5P-PVRIG2P-PILRB [HugePedia]
snp3D : Map Gene to Disease101752399
BioCentury BCIQSTAG3L5P-PVRIG2P-PILRB
ClinGenSTAG3L5P-PVRIG2P-PILRB
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101752399
Clinical trialSTAG3L5P-PVRIG2P-PILRB
Miscellaneous
canSAR (ICR)STAG3L5P-PVRIG2P-PILRB (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSTAG3L5P-PVRIG2P-PILRB
EVEXSTAG3L5P-PVRIG2P-PILRB
GoPubMedSTAG3L5P-PVRIG2P-PILRB
iHOPSTAG3L5P-PVRIG2P-PILRB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:56:49 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.