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STARD7 (StAR related lipid transfer domain containing 7)

Identity

Alias (NCBI)FAME2
GTT1
HGNC (Hugo) STARD7
HGNC Alias symbGTT1
HGNC Previous nameSTART domain containing 7
LocusID (NCBI) 56910
Atlas_Id 56027
Location 2q11.2  [Link to chromosome band 2q11]
Location_base_pair Starts at 96184861 and ends at 96208835 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MELK (9p13.2) / STARD7 (2q11.2)NFE2 (12q13.13) / STARD7 (2q11.2)STARD7 (2q11.2) / STARD7 (2q11.2)
STMN1 (1p36.11) / STARD7 (2q11.2)UNC50 (2q11.2) / STARD7 (2q11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)STARD7   18063
Cards
Entrez_Gene (NCBI)STARD7    StAR related lipid transfer domain containing 7
AliasesFAME2; GTT1
GeneCards (Weizmann)STARD7
Ensembl hg19 (Hinxton)ENSG00000084090 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000084090 [Gene_View]  ENSG00000084090 [Sequence]  chr2:96184861-96208835 [Contig_View]  STARD7 [Vega]
ICGC DataPortalENSG00000084090
TCGA cBioPortalSTARD7
AceView (NCBI)STARD7
Genatlas (Paris)STARD7
SOURCE (Princeton)STARD7
Genetics Home Reference (NIH)STARD7
Genomic and cartography
GoldenPath hg38 (UCSC)STARD7  -     chr2:96184861-96208835 -  2q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)STARD7  -     2q11.2   [Description]    (hg19-Feb_2009)
GoldenPathSTARD7 - 2q11.2 [CytoView hg19]  STARD7 - 2q11.2 [CytoView hg38]
ImmunoBaseENSG00000084090
Genome Data Viewer NCBISTARD7 [Mapview hg19]  
OMIM607876   616712   
Gene and transcription
Genbank (Entrez)AB075479 AF270647 AK023234 AK054615 AK094925
RefSeq transcript (Entrez)NM_001385622 NM_020151 NM_139267
Consensus coding sequences : CCDS (NCBI)STARD7
Gene ExpressionSTARD7 [ NCBI-GEO ]   STARD7 [ EBI - ARRAY_EXPRESS ]   STARD7 [ SEEK ]   STARD7 [ MEM ]
Gene Expression Viewer (FireBrowse)STARD7 [ Firebrowse - Broad ]
GenevisibleExpression of STARD7 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56910
GTEX Portal (Tissue expression)STARD7
Human Protein AtlasENSG00000084090-STARD7 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NQZ5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NQZ5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NQZ5
PhosPhoSitePlusQ9NQZ5
Domaine pattern : Prosite (Expaxy)START (PS50848)   
Domains : Interpro (EBI)START-like_dom_sf    START_lipid-bd_dom    START_STARD7   
Domain families : Pfam (Sanger)START (PF01852)   
Domain families : Pfam (NCBI)pfam01852   
Domain families : Smart (EMBL)START (SM00234)  
Conserved Domain (NCBI)STARD7
SuperfamilyQ9NQZ5
AlphaFold pdb e-kbQ9NQZ5   
Human Protein Atlas [tissue]ENSG00000084090-STARD7 [tissue]
HPRD18118
Protein Interaction databases
DIP (DOE-UCLA)Q9NQZ5
IntAct (EBI)Q9NQZ5
BioGRIDSTARD7
STRING (EMBL)STARD7
ZODIACSTARD7
Ontologies - Pathways
QuickGOQ9NQZ5
Ontology : AmiGOprotein binding  mitochondrial outer membrane  phosphatidylcholine biosynthetic process  lipid binding  
Ontology : EGO-EBIprotein binding  mitochondrial outer membrane  phosphatidylcholine biosynthetic process  lipid binding  
NDEx NetworkSTARD7
Atlas of Cancer Signalling NetworkSTARD7
Wikipedia pathwaysSTARD7
Orthology - Evolution
OrthoDB56910
GeneTree (enSembl)ENSG00000084090
Phylogenetic Trees/Animal Genes : TreeFamSTARD7
Homologs : HomoloGeneSTARD7
Homology/Alignments : Family Browser (UCSC)STARD7
Gene fusions - Rearrangements
Fusion : QuiverSTARD7
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSTARD7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)STARD7
dbVarSTARD7
ClinVarSTARD7
MonarchSTARD7
1000_GenomesSTARD7 
Exome Variant ServerSTARD7
GNOMAD BrowserENSG00000084090
Varsome BrowserSTARD7
ACMGSTARD7 variants
VarityQ9NQZ5
Genomic Variants (DGV)STARD7 [DGVbeta]
DECIPHERSTARD7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSTARD7 
Mutations
ICGC Data PortalSTARD7 
TCGA Data PortalSTARD7 
Broad Tumor PortalSTARD7
OASIS PortalSTARD7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSTARD7  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DSTARD7
Mutations and Diseases : HGMDSTARD7
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaSTARD7
DgiDB (Drug Gene Interaction Database)STARD7
DoCM (Curated mutations)STARD7
CIViC (Clinical Interpretations of Variants in Cancer)STARD7
Cancer3DSTARD7
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607876    616712   
Orphanet
DisGeNETSTARD7
MedgenSTARD7
Genetic Testing Registry STARD7
NextProtQ9NQZ5 [Medical]
GENETestsSTARD7
Target ValidationSTARD7
Huge Navigator STARD7 [HugePedia]
ClinGenSTARD7
Clinical trials, drugs, therapy
MyCancerGenomeSTARD7
Protein Interactions : CTDSTARD7
Pharm GKB GenePA38285
PharosQ9NQZ5
Clinical trialSTARD7
Miscellaneous
canSAR (ICR)STARD7
HarmonizomeSTARD7
DataMed IndexSTARD7
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSTARD7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:33:31 CEST 2021

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