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STK11IP (serine/threonine kinase 11 interacting protein)

Identity

Alias_symbol (synonym)LIP1
KIAA1898
LKB1IP
STK11IP1
Other alias
HGNC (Hugo) STK11IP
LocusID (NCBI) 114790
Atlas_Id 49892
Location 2q35  [Link to chromosome band 2q35]
Location_base_pair Starts at 219597851 and ends at 219616451 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)STK11IP   19184
Cards
Entrez_Gene (NCBI)STK11IP  114790  serine/threonine kinase 11 interacting protein
AliasesLIP1; LKB1IP; STK11IP1
GeneCards (Weizmann)STK11IP
Ensembl hg19 (Hinxton)ENSG00000144589 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000144589 [Gene_View]  chr2:219597851-219616451 [Contig_View]  STK11IP [Vega]
ICGC DataPortalENSG00000144589
TCGA cBioPortalSTK11IP
AceView (NCBI)STK11IP
Genatlas (Paris)STK11IP
WikiGenes114790
SOURCE (Princeton)STK11IP
Genetics Home Reference (NIH)STK11IP
Genomic and cartography
GoldenPath hg38 (UCSC)STK11IP  -     chr2:219597851-219616451 +  2q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)STK11IP  -     2q35   [Description]    (hg19-Feb_2009)
EnsemblSTK11IP - 2q35 [CytoView hg19]  STK11IP - 2q35 [CytoView hg38]
Mapping of homologs : NCBISTK11IP [Mapview hg19]  STK11IP [Mapview hg38]
OMIM607172   
Gene and transcription
Genbank (Entrez)AB067485 AF450267 AK091963 AK295609 AK296632
RefSeq transcript (Entrez)NM_052902
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)STK11IP
Cluster EST : UnigeneHs.22410 [ NCBI ]
CGAP (NCI)Hs.22410
Alternative Splicing GalleryENSG00000144589
Gene ExpressionSTK11IP [ NCBI-GEO ]   STK11IP [ EBI - ARRAY_EXPRESS ]   STK11IP [ SEEK ]   STK11IP [ MEM ]
Gene Expression Viewer (FireBrowse)STK11IP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)114790
GTEX Portal (Tissue expression)STK11IP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N1F8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N1F8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N1F8
Splice isoforms : SwissVarQ8N1F8
PhosPhoSitePlusQ8N1F8
Domaine pattern : Prosite (Expaxy)LRR (PS51450)   
Domains : Interpro (EBI)L_dom-like    Leu-rich_rpt    LIP1_N   
Domain families : Pfam (Sanger)LIP1 (PF15904)   
Domain families : Pfam (NCBI)pfam15904   
Conserved Domain (NCBI)STK11IP
DMDM Disease mutations114790
Blocks (Seattle)STK11IP
SuperfamilyQ8N1F8
Human Protein AtlasENSG00000144589
Peptide AtlasQ8N1F8
HPRD06207
IPIIPI00170934   IPI00885068   IPI00892703   IPI00910117   IPI00893226   IPI00893083   
Protein Interaction databases
DIP (DOE-UCLA)Q8N1F8
IntAct (EBI)Q8N1F8
FunCoupENSG00000144589
BioGRIDSTK11IP
STRING (EMBL)STK11IP
ZODIACSTK11IP
Ontologies - Pathways
QuickGOQ8N1F8
Ontology : AmiGOextracellular region  cytoplasm  lysosomal membrane  protein localization  protein kinase binding  azurophil granule lumen  intracellular membrane-bounded organelle  neutrophil degranulation  
Ontology : EGO-EBIextracellular region  cytoplasm  lysosomal membrane  protein localization  protein kinase binding  azurophil granule lumen  intracellular membrane-bounded organelle  neutrophil degranulation  
NDEx NetworkSTK11IP
Atlas of Cancer Signalling NetworkSTK11IP
Wikipedia pathwaysSTK11IP
Orthology - Evolution
OrthoDB114790
GeneTree (enSembl)ENSG00000144589
Phylogenetic Trees/Animal Genes : TreeFamSTK11IP
HOVERGENQ8N1F8
HOGENOMQ8N1F8
Homologs : HomoloGeneSTK11IP
Homology/Alignments : Family Browser (UCSC)STK11IP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSTK11IP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)STK11IP
dbVarSTK11IP
ClinVarSTK11IP
1000_GenomesSTK11IP 
Exome Variant ServerSTK11IP
ExAC (Exome Aggregation Consortium)STK11IP (select the gene name)
Genetic variants : HAPMAP114790
Genomic Variants (DGV)STK11IP [DGVbeta]
DECIPHERSTK11IP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSTK11IP 
Mutations
ICGC Data PortalSTK11IP 
TCGA Data PortalSTK11IP 
Broad Tumor PortalSTK11IP
OASIS PortalSTK11IP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSTK11IP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSTK11IP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch STK11IP
DgiDB (Drug Gene Interaction Database)STK11IP
DoCM (Curated mutations)STK11IP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)STK11IP (select a term)
intoGenSTK11IP
Cancer3DSTK11IP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607172   
Orphanet
MedgenSTK11IP
Genetic Testing Registry STK11IP
NextProtQ8N1F8 [Medical]
TSGene114790
GENETestsSTK11IP
Target ValidationSTK11IP
Huge Navigator STK11IP [HugePedia]
snp3D : Map Gene to Disease114790
BioCentury BCIQSTK11IP
ClinGenSTK11IP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD114790
Chemical/Pharm GKB GenePA38822
Clinical trialSTK11IP
Miscellaneous
canSAR (ICR)STK11IP (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSTK11IP
EVEXSTK11IP
GoPubMedSTK11IP
iHOPSTK11IP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:33:29 CEST 2017

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