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STK16 (serine/threonine kinase 16)

Identity

Other namesKRCT
MPSK
PKL12
TSF1
HGNC (Hugo) STK16
LocusID (NCBI) 8576
Location 2q35
Location_base_pair Starts at 220110192 and ends at 220115059 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)STK16   11394
Entrez_Gene (NCBI)STK16  8576  serine/threonine kinase 16
Cards
GeneCards (Weizmann)STK16
Ensembl (Hinxton)ENSG00000115661 [Gene_View]  chr2:220110192-220115059 [Contig_View]  STK16 [Vega]
AceView (NCBI)STK16
Genatlas (Paris)STK16
SOURCE (Stanford)NM_001008910 NM_003691 NM_032768
Genomic and cartography
GoldenPath (UCSC)STK16  -  2q35   chr2:220110192-220115059 +  2q35   [Description]    (hg19-Feb_2009)
EnsemblSTK16 - 2q35 [CytoView]
Mapping of homologs : NCBISTK16 [Mapview]
OMIM604719   
Gene and transcription
Genbank (Entrez)AA741170 AB020739 AF060798 AF203910 AJ005791
RefSeq transcript (SRS)NM_001008910 NM_003691 NM_032768
RefSeq transcript (Entrez)NM_001008910 NM_003691 NM_032768
RefSeq genomic (SRS)AC_000134 NC_000002 NC_018913 NT_005403 NW_001838865 NW_004078008
RefSeq genomic (Entrez)AC_000134 NC_000002 NC_018913 NT_005403 NW_001838865 NW_004078008
Consensus coding sequences : CCDS (NCBI)STK16
Cluster EST : UnigeneHs.153003 [ SRS ] Hs.153003 [ NCBI ]
CGAP (NCI)Hs.153003
Alternative Splicing : Fast-db (Paris)GSHG0017211
Alternative Splicing GalleryENSG00000115661
Gene ExpressionSTK16 [ NCBI-GEO ]   STK16 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75716 (SRS) O75716 (Uniprot)
NextProtO75716
With graphics : InterProO75716
Splice isoforms : SwissVarO75716(Swissvar)
Domaine pattern : Prosite (SRS)PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domaine pattern : Prosite (Expaxy)PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domains : Interpro (SRS)Kinase-like_dom    Prot_kinase_cat_dom    Ser/Thr_kinase_AS   
Domains : Interpro (EBI)Kinase-like_dom    Prot_kinase_cat_dom    Ser/Thr_kinase_AS   
Related proteins : CluSTrO75716
Domain families : Pfam (SRS)Pkinase (PF00069)   
Domain families : Pfam (Sanger)Pkinase (PF00069)   
Domain families : Pfam (NCBI)pfam00069   
DMDM8576
Blocks (Seattle)O75716
PDB (SRS)2BUJ   
PDB (PDBSum)2BUJ   
PDB (IMB)2BUJ   
PDB (RSDB)2BUJ   
Human Protein AtlasENSG00000115661
HPRD05281
IPIIPI00306833   IPI00909976   IPI00915837   IPI00916226   
Protein Interaction databases
DIP (DOE-UCLA)O75716
IntAct (EBI)O75716
FunCoupENSG00000115661
REACTOMESTK16
Protein Interaction Database8576
BioGRIDSTK16
InParanoidO75716
Interologous Interaction database O75716
IntegromeDBSTK16
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)STK16
SNP (GeneSNP Utah)STK16
SNP : HGBaseSTK16
Genetic variants : HAPMAPSTK16
Somatic Mutations in Cancer : COSMICSTK16 
CONAN: Copy Number AnalysisSTK16 
Mutations and Diseases : HGMDSTK16
OMIM604719   
GENETests604719   
Disease Genetic AssociationSTK16
Huge Navigator STK16 [HugePedia]  STK16 [HugeCancerGEM]
Genomic VariantsSTK16  STK16 [DGVbeta]
snp3D : Map Gene to Disease8576
General knowledge
Homologs : HomoloGeneSTK16
Homology/Alignments : Family Browser (UCSC)STK16
Phylogenetic Trees/Animal Genes : TreeFamSTK16
Catalytic activity : Enzyme2.7.11.1 [ Enzyme-Expasy ]   2.7.11.1 [ Enzyme-SRS ]   2.7.11.1 [ IntEnz-EBI ]   2.7.11.1 [ BRENDA ]   2.7.11.1 [ KEGG ]   
Chemical/Protein Interactions : CTD8576
Chemical/Pharm GKB GenePA36202
Clinical trialSTK16
Cancer Resource (Charite)ENSG00000115661
Ontology : AmiGODNA binding  protein serine/threonine kinase activity  non-membrane spanning protein tyrosine kinase activity  protein binding  ATP binding  Golgi-associated vesicle  membrane  positive regulation of transcription from RNA polymerase II promoter  protein autophosphorylation  perinuclear region of cytoplasm  
Ontology : EGO-EBIDNA binding  protein serine/threonine kinase activity  non-membrane spanning protein tyrosine kinase activity  protein binding  ATP binding  Golgi-associated vesicle  membrane  positive regulation of transcription from RNA polymerase II promoter  protein autophosphorylation  perinuclear region of cytoplasm  
Other databases
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
PubGeneSTK16
iHOPSTK16
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:40:41 CEST 2013
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