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STK31 (serine/threonine kinase 31)

Identity

Alias_symbol (synonym)TDRD8
SgK396
Other aliasSGK396
HGNC (Hugo) STK31
LocusID (NCBI) 56164
Atlas_Id 43511
Location 7p15.3  [Link to chromosome band 7p15]
Location_base_pair Starts at 23749945 and ends at 23872130 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CCDC88C (14q32.11) / STK31 (7p15.3)SLC25A13 (7q21.3) / STK31 (7p15.3)SLC25A13 7q21.3 / STK31 7p15.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)STK31   11407
Cards
Entrez_Gene (NCBI)STK31  56164  serine/threonine kinase 31
AliasesSGK396; TDRD8
GeneCards (Weizmann)STK31
Ensembl hg19 (Hinxton)ENSG00000196335 [Gene_View]  chr7:23749945-23872130 [Contig_View]  STK31 [Vega]
Ensembl hg38 (Hinxton)ENSG00000196335 [Gene_View]  chr7:23749945-23872130 [Contig_View]  STK31 [Vega]
ICGC DataPortalENSG00000196335
TCGA cBioPortalSTK31
AceView (NCBI)STK31
Genatlas (Paris)STK31
WikiGenes56164
SOURCE (Princeton)STK31
Genetics Home Reference (NIH)STK31
Genomic and cartography
GoldenPath hg19 (UCSC)STK31  -     chr7:23749945-23872130 +  7p15.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)STK31  -     7p15.3   [Description]    (hg38-Dec_2013)
EnsemblSTK31 - 7p15.3 [CytoView hg19]  STK31 - 7p15.3 [CytoView hg38]
Mapping of homologs : NCBISTK31 [Mapview hg19]  STK31 [Mapview hg38]
OMIM605790   
Gene and transcription
Genbank (Entrez)AA315045 AF285599 AF332194 AK057271 AK131214
RefSeq transcript (Entrez)NM_001122833 NM_001260504 NM_001260505 NM_031414 NM_032944
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007819 NW_004929329
Consensus coding sequences : CCDS (NCBI)STK31
Cluster EST : UnigeneHs.309767 [ NCBI ]
CGAP (NCI)Hs.309767
Alternative Splicing GalleryENSG00000196335
Gene ExpressionSTK31 [ NCBI-GEO ]   STK31 [ EBI - ARRAY_EXPRESS ]   STK31 [ SEEK ]   STK31 [ MEM ]
Gene Expression Viewer (FireBrowse)STK31 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56164
GTEX Portal (Tissue expression)STK31
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BXU1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BXU1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BXU1
Splice isoforms : SwissVarQ9BXU1
Catalytic activity : Enzyme2.7.11.1 [ Enzyme-Expasy ]   2.7.11.12.7.11.1 [ IntEnz-EBI ]   2.7.11.1 [ BRENDA ]   2.7.11.1 [ KEGG ]   
PhosPhoSitePlusQ9BXU1
Domaine pattern : Prosite (Expaxy)PROTEIN_KINASE_DOM (PS50011)    TUDOR (PS50304)   
Domains : Interpro (EBI)Kinase-like_dom    Prot_kinase_dom    Staphylococal_nuclease_OB-fold    Tudor   
Domain families : Pfam (Sanger)Pkinase (PF00069)    TUDOR (PF00567)   
Domain families : Pfam (NCBI)pfam00069    pfam00567   
Domain families : Smart (EMBL)TUDOR (SM00333)  
Conserved Domain (NCBI)STK31
DMDM Disease mutations56164
Blocks (Seattle)STK31
SuperfamilyQ9BXU1
Human Protein AtlasENSG00000196335
Peptide AtlasQ9BXU1
HPRD10427
IPIIPI00419204   IPI00843776   IPI00893628   IPI00893686   IPI00894233   IPI00894452   IPI00974451   
Protein Interaction databases
DIP (DOE-UCLA)Q9BXU1
IntAct (EBI)Q9BXU1
FunCoupENSG00000196335
BioGRIDSTK31
STRING (EMBL)STK31
ZODIACSTK31
Ontologies - Pathways
QuickGOQ9BXU1
Ontology : AmiGOacrosomal vesicle  protein serine/threonine kinase activity  ATP binding  protein phosphorylation  
Ontology : EGO-EBIacrosomal vesicle  protein serine/threonine kinase activity  ATP binding  protein phosphorylation  
NDEx NetworkSTK31
Atlas of Cancer Signalling NetworkSTK31
Wikipedia pathwaysSTK31
Orthology - Evolution
OrthoDB56164
GeneTree (enSembl)ENSG00000196335
Phylogenetic Trees/Animal Genes : TreeFamSTK31
HOVERGENQ9BXU1
HOGENOMQ9BXU1
Homologs : HomoloGeneSTK31
Homology/Alignments : Family Browser (UCSC)STK31
Gene fusions - Rearrangements
Fusion : MitelmanSLC25A13/STK31 [7q21.3/7p15.3]  [t(7;7)(p15;q21)]  
Fusion: TCGASLC25A13 7q21.3 STK31 7p15.3 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSTK31 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)STK31
dbVarSTK31
ClinVarSTK31
1000_GenomesSTK31 
Exome Variant ServerSTK31
ExAC (Exome Aggregation Consortium)STK31 (select the gene name)
Genetic variants : HAPMAP56164
Genomic Variants (DGV)STK31 [DGVbeta]
DECIPHER (Syndromes)7:23749945-23872130  ENSG00000196335
CONAN: Copy Number AnalysisSTK31 
Mutations
ICGC Data PortalSTK31 
TCGA Data PortalSTK31 
Broad Tumor PortalSTK31
OASIS PortalSTK31 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSTK31  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSTK31
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch STK31
DgiDB (Drug Gene Interaction Database)STK31
DoCM (Curated mutations)STK31 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)STK31 (select a term)
intoGenSTK31
Cancer3DSTK31(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605790   
Orphanet
MedgenSTK31
Genetic Testing Registry STK31
NextProtQ9BXU1 [Medical]
TSGene56164
GENETestsSTK31
Huge Navigator STK31 [HugePedia]
snp3D : Map Gene to Disease56164
BioCentury BCIQSTK31
ClinGenSTK31
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56164
Chemical/Pharm GKB GenePA36214
Clinical trialSTK31
Miscellaneous
canSAR (ICR)STK31 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSTK31
EVEXSTK31
GoPubMedSTK31
iHOPSTK31
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:21:16 CEST 2017

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