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STK32B (serine/threonine kinase 32B)

Identity

Alias_symbol (synonym)STKG6
YANK2
STK32
HSA250839
Other alias
HGNC (Hugo) STK32B
LocusID (NCBI) 55351
Atlas_Id 43512
Location 4p16.2  [Link to chromosome band 4p16]
Location_base_pair Starts at 5051517 and ends at 5501001 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
STK32B (4p16.2) / PLEKHM3 (2q33.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)STK32B   14217
Cards
Entrez_Gene (NCBI)STK32B  55351  serine/threonine kinase 32B
AliasesHSA250839; STK32; STKG6; YANK2
GeneCards (Weizmann)STK32B
Ensembl hg19 (Hinxton)ENSG00000152953 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000152953 [Gene_View]  chr4:5051517-5501001 [Contig_View]  STK32B [Vega]
ICGC DataPortalENSG00000152953
TCGA cBioPortalSTK32B
AceView (NCBI)STK32B
Genatlas (Paris)STK32B
WikiGenes55351
SOURCE (Princeton)STK32B
Genetics Home Reference (NIH)STK32B
Genomic and cartography
GoldenPath hg38 (UCSC)STK32B  -     chr4:5051517-5501001 +  4p16.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)STK32B  -     4p16.2   [Description]    (hg19-Feb_2009)
EnsemblSTK32B - 4p16.2 [CytoView hg19]  STK32B - 4p16.2 [CytoView hg38]
Mapping of homologs : NCBISTK32B [Mapview hg19]  STK32B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI871614 AJ250839 AK055597 AK292696 AK302915
RefSeq transcript (Entrez)NM_001306082 NM_001345969 NM_018401
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)STK32B
Cluster EST : UnigeneHs.694667 [ NCBI ]
CGAP (NCI)Hs.694667
Alternative Splicing GalleryENSG00000152953
Gene ExpressionSTK32B [ NCBI-GEO ]   STK32B [ EBI - ARRAY_EXPRESS ]   STK32B [ SEEK ]   STK32B [ MEM ]
Gene Expression Viewer (FireBrowse)STK32B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55351
GTEX Portal (Tissue expression)STK32B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NY57   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NY57  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NY57
Splice isoforms : SwissVarQ9NY57
Catalytic activity : Enzyme2.7.11.1 [ Enzyme-Expasy ]   2.7.11.12.7.11.1 [ IntEnz-EBI ]   2.7.11.1 [ BRENDA ]   2.7.11.1 [ KEGG ]   
PhosPhoSitePlusQ9NY57
Domaine pattern : Prosite (Expaxy)PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domains : Interpro (EBI)Kinase-like_dom    Prot_kinase_dom    Protein_kinase_ATP_BS    Ser/Thr_kinase_AS   
Domain families : Pfam (Sanger)Pkinase (PF00069)   
Domain families : Pfam (NCBI)pfam00069   
Domain families : Smart (EMBL)S_TKc (SM00220)  
Conserved Domain (NCBI)STK32B
DMDM Disease mutations55351
Blocks (Seattle)STK32B
SuperfamilyQ9NY57
Human Protein AtlasENSG00000152953
Peptide AtlasQ9NY57
HPRD15446
IPIIPI00293334   IPI00746749   IPI00966090   IPI00967427   
Protein Interaction databases
DIP (DOE-UCLA)Q9NY57
IntAct (EBI)Q9NY57
FunCoupENSG00000152953
BioGRIDSTK32B
STRING (EMBL)STK32B
ZODIACSTK32B
Ontologies - Pathways
QuickGOQ9NY57
Ontology : AmiGOprotein serine/threonine kinase activity  ATP binding  intracellular  peptidyl-serine phosphorylation  intracellular signal transduction  metal ion binding  
Ontology : EGO-EBIprotein serine/threonine kinase activity  ATP binding  intracellular  peptidyl-serine phosphorylation  intracellular signal transduction  metal ion binding  
NDEx NetworkSTK32B
Atlas of Cancer Signalling NetworkSTK32B
Wikipedia pathwaysSTK32B
Orthology - Evolution
OrthoDB55351
GeneTree (enSembl)ENSG00000152953
Phylogenetic Trees/Animal Genes : TreeFamSTK32B
HOVERGENQ9NY57
HOGENOMQ9NY57
Homologs : HomoloGeneSTK32B
Homology/Alignments : Family Browser (UCSC)STK32B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSTK32B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)STK32B
dbVarSTK32B
ClinVarSTK32B
1000_GenomesSTK32B 
Exome Variant ServerSTK32B
ExAC (Exome Aggregation Consortium)STK32B (select the gene name)
Genetic variants : HAPMAP55351
Genomic Variants (DGV)STK32B [DGVbeta]
DECIPHERSTK32B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSTK32B 
Mutations
ICGC Data PortalSTK32B 
TCGA Data PortalSTK32B 
Broad Tumor PortalSTK32B
OASIS PortalSTK32B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSTK32B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSTK32B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch STK32B
DgiDB (Drug Gene Interaction Database)STK32B
DoCM (Curated mutations)STK32B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)STK32B (select a term)
intoGenSTK32B
Cancer3DSTK32B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenSTK32B
Genetic Testing Registry STK32B
NextProtQ9NY57 [Medical]
TSGene55351
GENETestsSTK32B
Target ValidationSTK32B
Huge Navigator STK32B [HugePedia]
snp3D : Map Gene to Disease55351
BioCentury BCIQSTK32B
ClinGenSTK32B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55351
Chemical/Pharm GKB GenePA128394683
Clinical trialSTK32B
Miscellaneous
canSAR (ICR)STK32B (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSTK32B
EVEXSTK32B
GoPubMedSTK32B
iHOPSTK32B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:15:59 CEST 2017

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