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STK32C (serine/threonine kinase 32C)

Identity

Alias_symbol (synonym)PKE
MGC23665
YANK3
Other alias
HGNC (Hugo) STK32C
LocusID (NCBI) 282974
Atlas_Id 74310
Location 10q26.3  [Link to chromosome band 10q26]
Location_base_pair Starts at 132207482 and ends at 132331875 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MYO19 (17q12) / STK32C (10q26.3)STK32C (10q26.3) / PWWP2B (10q26.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)STK32C   21332
Cards
Entrez_Gene (NCBI)STK32C  282974  serine/threonine kinase 32C
AliasesPKE; YANK3
GeneCards (Weizmann)STK32C
Ensembl hg19 (Hinxton)ENSG00000165752 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165752 [Gene_View]  chr10:132207482-132331875 [Contig_View]  STK32C [Vega]
ICGC DataPortalENSG00000165752
TCGA cBioPortalSTK32C
AceView (NCBI)STK32C
Genatlas (Paris)STK32C
WikiGenes282974
SOURCE (Princeton)STK32C
Genetics Home Reference (NIH)STK32C
Genomic and cartography
GoldenPath hg38 (UCSC)STK32C  -     chr10:132207482-132331875 -  10q26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)STK32C  -     10q26.3   [Description]    (hg19-Feb_2009)
EnsemblSTK32C - 10q26.3 [CytoView hg19]  STK32C - 10q26.3 [CytoView hg38]
Mapping of homologs : NCBISTK32C [Mapview hg19]  STK32C [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA782619 AI911241 AK057849 AK098366 AK302102
RefSeq transcript (Entrez)NM_001318878 NM_001318879 NM_001318880 NM_001318881 NM_001318882 NM_001318883 NM_173575
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)STK32C
Cluster EST : UnigeneHs.729440 [ NCBI ]
CGAP (NCI)Hs.729440
Alternative Splicing GalleryENSG00000165752
Gene ExpressionSTK32C [ NCBI-GEO ]   STK32C [ EBI - ARRAY_EXPRESS ]   STK32C [ SEEK ]   STK32C [ MEM ]
Gene Expression Viewer (FireBrowse)STK32C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)282974
GTEX Portal (Tissue expression)STK32C
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86UX6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86UX6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86UX6
Splice isoforms : SwissVarQ86UX6
Catalytic activity : Enzyme2.7.11.1 [ Enzyme-Expasy ]   2.7.11.12.7.11.1 [ IntEnz-EBI ]   2.7.11.1 [ BRENDA ]   2.7.11.1 [ KEGG ]   
PhosPhoSitePlusQ86UX6
Domaine pattern : Prosite (Expaxy)PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domains : Interpro (EBI)Kinase-like_dom    Prot_kinase_dom    Protein_kinase_ATP_BS    Ser/Thr_kinase_AS   
Domain families : Pfam (Sanger)Pkinase (PF00069)   
Domain families : Pfam (NCBI)pfam00069   
Domain families : Smart (EMBL)S_TKc (SM00220)  
Conserved Domain (NCBI)STK32C
DMDM Disease mutations282974
Blocks (Seattle)STK32C
SuperfamilyQ86UX6
Human Protein AtlasENSG00000165752
Peptide AtlasQ86UX6
HPRD18119
IPIIPI00328835   IPI00645556   IPI00922924   IPI00980224   IPI00514094   IPI00514998   IPI00646974   
Protein Interaction databases
DIP (DOE-UCLA)Q86UX6
IntAct (EBI)Q86UX6
FunCoupENSG00000165752
BioGRIDSTK32C
STRING (EMBL)STK32C
ZODIACSTK32C
Ontologies - Pathways
QuickGOQ86UX6
Ontology : AmiGOprotein serine/threonine kinase activity  ATP binding  intracellular  peptidyl-serine phosphorylation  intracellular signal transduction  metal ion binding  
Ontology : EGO-EBIprotein serine/threonine kinase activity  ATP binding  intracellular  peptidyl-serine phosphorylation  intracellular signal transduction  metal ion binding  
NDEx NetworkSTK32C
Atlas of Cancer Signalling NetworkSTK32C
Wikipedia pathwaysSTK32C
Orthology - Evolution
OrthoDB282974
GeneTree (enSembl)ENSG00000165752
Phylogenetic Trees/Animal Genes : TreeFamSTK32C
HOVERGENQ86UX6
HOGENOMQ86UX6
Homologs : HomoloGeneSTK32C
Homology/Alignments : Family Browser (UCSC)STK32C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSTK32C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)STK32C
dbVarSTK32C
ClinVarSTK32C
1000_GenomesSTK32C 
Exome Variant ServerSTK32C
ExAC (Exome Aggregation Consortium)STK32C (select the gene name)
Genetic variants : HAPMAP282974
Genomic Variants (DGV)STK32C [DGVbeta]
DECIPHERSTK32C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSTK32C 
Mutations
ICGC Data PortalSTK32C 
TCGA Data PortalSTK32C 
Broad Tumor PortalSTK32C
OASIS PortalSTK32C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSTK32C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSTK32C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch STK32C
DgiDB (Drug Gene Interaction Database)STK32C
DoCM (Curated mutations)STK32C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)STK32C (select a term)
intoGenSTK32C
Cancer3DSTK32C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenSTK32C
Genetic Testing Registry STK32C
NextProtQ86UX6 [Medical]
TSGene282974
GENETestsSTK32C
Target ValidationSTK32C
Huge Navigator STK32C [HugePedia]
snp3D : Map Gene to Disease282974
BioCentury BCIQSTK32C
ClinGenSTK32C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD282974
Chemical/Pharm GKB GenePA134888050
Clinical trialSTK32C
Miscellaneous
canSAR (ICR)STK32C (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSTK32C
EVEXSTK32C
GoPubMedSTK32C
iHOPSTK32C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:44:23 CEST 2017

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