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STON1-GTF2A1L (STON1-GTF2A1L readthrough)

Identity

Alias_symbol (synonym)SALF
Other alias
HGNC (Hugo) STON1-GTF2A1L
LocusID (NCBI) 286749
Atlas_Id 74319
Location 2p16.3  [Link to chromosome band 2p16]
Location_base_pair Starts at 48529925 and ends at 48776517 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
PSME4 (2p16.2) / STON1-GTF2A1L (2p16.3)PYGL (14q22.1) / STON1-GTF2A1L (2p16.3)STON1-GTF2A1L (2p16.3) / ACOT13 (6p22.3)
STON1-GTF2A1L (2p16.3) / STON1-GTF2A1L (2p16.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)STON1-GTF2A1L   30651
Cards
Entrez_Gene (NCBI)STON1-GTF2A1L  286749  STON1-GTF2A1L readthrough
AliasesSALF
GeneCards (Weizmann)STON1-GTF2A1L
Ensembl hg19 (Hinxton)ENSG00000068781 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000068781 [Gene_View]  chr2:48529925-48776517 [Contig_View]  STON1-GTF2A1L [Vega]
ICGC DataPortalENSG00000068781
TCGA cBioPortalSTON1-GTF2A1L
AceView (NCBI)STON1-GTF2A1L
Genatlas (Paris)STON1-GTF2A1L
WikiGenes286749
SOURCE (Princeton)STON1-GTF2A1L
Genetics Home Reference (NIH)STON1-GTF2A1L
Genomic and cartography
GoldenPath hg38 (UCSC)STON1-GTF2A1L  -     chr2:48529925-48776517 +  2p16.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)STON1-GTF2A1L  -     2p16.3   [Description]    (hg19-Feb_2009)
EnsemblSTON1-GTF2A1L - 2p16.3 [CytoView hg19]  STON1-GTF2A1L - 2p16.3 [CytoView hg38]
Mapping of homologs : NCBISTON1-GTF2A1L [Mapview hg19]  STON1-GTF2A1L [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF026169 AK309740 BC101772 BC101774 BC143520
RefSeq transcript (Entrez)NM_001198593 NM_001198594 NM_172311
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)STON1-GTF2A1L
Cluster EST : UnigeneHs.732016 [ NCBI ]
CGAP (NCI)Hs.732016
Alternative Splicing GalleryENSG00000068781
Gene ExpressionSTON1-GTF2A1L [ NCBI-GEO ]   STON1-GTF2A1L [ EBI - ARRAY_EXPRESS ]   STON1-GTF2A1L [ SEEK ]   STON1-GTF2A1L [ MEM ]
Gene Expression Viewer (FireBrowse)STON1-GTF2A1L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)286749
GTEX Portal (Tissue expression)STON1-GTF2A1L
Human Protein AtlasENSG00000068781-STON1-GTF2A1L [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)STON1-GTF2A1L
DMDM Disease mutations286749
Blocks (Seattle)STON1-GTF2A1L
Human Protein Atlas [tissue]ENSG00000068781-STON1-GTF2A1L [tissue]
HPRD18496
IPIIPI00941824   IPI00976407   IPI00337314   IPI00893492   
Protein Interaction databases
FunCoupENSG00000068781
BioGRIDSTON1-GTF2A1L
STRING (EMBL)STON1-GTF2A1L
ZODIACSTON1-GTF2A1L
Ontologies - Pathways
Huge Navigator STON1-GTF2A1L [HugePedia]
snp3D : Map Gene to Disease286749
BioCentury BCIQSTON1-GTF2A1L
ClinGenSTON1-GTF2A1L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD286749
Chemical/Pharm GKB GenePA162405016
Clinical trialSTON1-GTF2A1L
Miscellaneous
canSAR (ICR)STON1-GTF2A1L (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into FunctIons 8Eîtrez)
CoreMineSTON1-GTF2A1L
EVEXSTON1-GTF2A1L
GoPubMedSTON1-GTF2A1L
iHOPSTON1-GTF2A1L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:06:31 CET 2017

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