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STON2 (stonin 2)

Identity

Alias_symbol (synonym)STNB2
STN2
Other aliasSTNB
HGNC (Hugo) STON2
LocusID (NCBI) 85439
Atlas_Id 74320
Location 14q31.1  [Link to chromosome band 14q31]
Location_base_pair Starts at 81260650 and ends at 81427404 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
STON2 (14q31.1) / TJP2 (9q21.11)STON2 (14q31.1) / TNS1 (2q35)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)STON2   30652
Cards
Entrez_Gene (NCBI)STON2  85439  stonin 2
AliasesSTN2; STNB; STNB2
GeneCards (Weizmann)STON2
Ensembl hg19 (Hinxton)ENSG00000140022 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000140022 [Gene_View]  chr14:81260650-81427404 [Contig_View]  STON2 [Vega]
ICGC DataPortalENSG00000140022
TCGA cBioPortalSTON2
AceView (NCBI)STON2
Genatlas (Paris)STON2
WikiGenes85439
SOURCE (Princeton)STON2
Genetics Home Reference (NIH)STON2
Genomic and cartography
GoldenPath hg38 (UCSC)STON2  -     chr14:81260650-81427404 -  14q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)STON2  -     14q31.1   [Description]    (hg19-Feb_2009)
EnsemblSTON2 - 14q31.1 [CytoView hg19]  STON2 - 14q31.1 [CytoView hg38]
Mapping of homologs : NCBISTON2 [Mapview hg19]  STON2 [Mapview hg38]
OMIM608467   
Gene and transcription
Genbank (Entrez)AB208948 AF255309 AF380833 AF449430 AK094799
RefSeq transcript (Entrez)NM_001256430 NM_033104
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)STON2
Cluster EST : UnigeneHs.14248 [ NCBI ]
CGAP (NCI)Hs.14248
Alternative Splicing GalleryENSG00000140022
Gene ExpressionSTON2 [ NCBI-GEO ]   STON2 [ EBI - ARRAY_EXPRESS ]   STON2 [ SEEK ]   STON2 [ MEM ]
Gene Expression Viewer (FireBrowse)STON2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)85439
GTEX Portal (Tissue expression)STON2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WXE9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WXE9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WXE9
Splice isoforms : SwissVarQ8WXE9
PhosPhoSitePlusQ8WXE9
Domaine pattern : Prosite (Expaxy)MHD (PS51072)    SHD (PS51070)   
Domains : Interpro (EBI)MHD    SHD    STON2    Stonin    Stonin2_N   
Domain families : Pfam (Sanger)Adap_comp_sub (PF00928)    Stonin2_N (PF12016)   
Domain families : Pfam (NCBI)pfam00928    pfam12016   
Conserved Domain (NCBI)STON2
DMDM Disease mutations85439
Blocks (Seattle)STON2
PDB (SRS)2JXC   
PDB (PDBSum)2JXC   
PDB (IMB)2JXC   
PDB (RSDB)2JXC   
Structural Biology KnowledgeBase2JXC   
SCOP (Structural Classification of Proteins)2JXC   
CATH (Classification of proteins structures)2JXC   
SuperfamilyQ8WXE9
Human Protein AtlasENSG00000140022
Peptide AtlasQ8WXE9
HPRD10531
IPIIPI00103521   IPI01013065   IPI01025782   IPI01026067   IPI01025675   IPI01025351   
Protein Interaction databases
DIP (DOE-UCLA)Q8WXE9
IntAct (EBI)Q8WXE9
FunCoupENSG00000140022
BioGRIDSTON2
STRING (EMBL)STON2
ZODIACSTON2
Ontologies - Pathways
QuickGOQ8WXE9
Ontology : AmiGOhematopoietic progenitor cell differentiation  protein binding  nucleolus  cytosol  cytosol  synaptic vesicle  membrane  cell junction  regulation of endocytosis  clathrin-coated vesicle  neuron projection  synaptic vesicle endocytosis  membrane organization  
Ontology : EGO-EBIhematopoietic progenitor cell differentiation  protein binding  nucleolus  cytosol  cytosol  synaptic vesicle  membrane  cell junction  regulation of endocytosis  clathrin-coated vesicle  neuron projection  synaptic vesicle endocytosis  membrane organization  
NDEx NetworkSTON2
Atlas of Cancer Signalling NetworkSTON2
Wikipedia pathwaysSTON2
Orthology - Evolution
OrthoDB85439
GeneTree (enSembl)ENSG00000140022
Phylogenetic Trees/Animal Genes : TreeFamSTON2
HOVERGENQ8WXE9
HOGENOMQ8WXE9
Homologs : HomoloGeneSTON2
Homology/Alignments : Family Browser (UCSC)STON2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSTON2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)STON2
dbVarSTON2
ClinVarSTON2
1000_GenomesSTON2 
Exome Variant ServerSTON2
ExAC (Exome Aggregation Consortium)STON2 (select the gene name)
Genetic variants : HAPMAP85439
Genomic Variants (DGV)STON2 [DGVbeta]
DECIPHERSTON2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSTON2 
Mutations
ICGC Data PortalSTON2 
TCGA Data PortalSTON2 
Broad Tumor PortalSTON2
OASIS PortalSTON2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSTON2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSTON2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch STON2
DgiDB (Drug Gene Interaction Database)STON2
DoCM (Curated mutations)STON2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)STON2 (select a term)
intoGenSTON2
Cancer3DSTON2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608467   
Orphanet
MedgenSTON2
Genetic Testing Registry STON2
NextProtQ8WXE9 [Medical]
TSGene85439
GENETestsSTON2
Target ValidationSTON2
Huge Navigator STON2 [HugePedia]
snp3D : Map Gene to Disease85439
BioCentury BCIQSTON2
ClinGenSTON2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD85439
Chemical/Pharm GKB GenePA143485624
Clinical trialSTON2
Miscellaneous
canSAR (ICR)STON2 (select the gene name)
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSTON2
EVEXSTON2
GoPubMedSTON2
iHOPSTON2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:40:40 CEST 2017

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