Atlas of Genetics and Cytogenetics in Oncology and Haematology


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STPG2-AS1 (STPG2 antisense RNA 1)

Identity

Alias_namesSTPG2 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) STPG2-AS1
LocusID (NCBI) 101410545
Atlas_Id 74324
Location 4q22.3  [Link to chromosome band 4q22]
Location_base_pair Starts at 97366926 and ends at 97490164 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)STPG2-AS1   41209
Cards
Entrez_Gene (NCBI)STPG2-AS1  101410545  STPG2 antisense RNA 1
Aliases
GeneCards (Weizmann)STPG2-AS1
Ensembl hg19 (Hinxton)ENSG00000251620 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251620 [Gene_View]  chr4:97366926-97490164 [Contig_View]  STPG2-AS1 [Vega]
ICGC DataPortalENSG00000251620
TCGA cBioPortalSTPG2-AS1
AceView (NCBI)STPG2-AS1
Genatlas (Paris)STPG2-AS1
WikiGenes101410545
SOURCE (Princeton)STPG2-AS1
Genetics Home Reference (NIH)STPG2-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)STPG2-AS1  -     chr4:97366926-97490164 +  4q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)STPG2-AS1  -     4q22.3   [Description]    (hg19-Feb_2009)
EnsemblSTPG2-AS1 - 4q22.3 [CytoView hg19]  STPG2-AS1 - 4q22.3 [CytoView hg38]
Mapping of homologs : NCBISTPG2-AS1 [Mapview hg19]  STPG2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA719663
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)STPG2-AS1
Cluster EST : UnigeneHs.628520 [ NCBI ]
CGAP (NCI)Hs.628520
Alternative Splicing GalleryENSG00000251620
Gene ExpressionSTPG2-AS1 [ NCBI-GEO ]   STPG2-AS1 [ EBI - ARRAY_EXPRESS ]   STPG2-AS1 [ SEEK ]   STPG2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)STPG2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101410545
GTEX Portal (Tissue expression)STPG2-AS1
Human Protein AtlasENSG00000251620-STPG2-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)STPG2-AS1
DMDM Disease mutations101410545
Blocks (Seattle)STPG2-AS1
Human Protein Atlas [tissue]ENSG00000251620-STPG2-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000251620
BioGRIDSTPG2-AS1
STRING (EMBL)STPG2-AS1
ZODIACSTPG2-AS1
Ontologies - Pathways
Huge Navigator STPG2-AS1 [HugePedia]
snp3D : Map Gene to Disease101410545
BioCentury BCIQSTPG2-AS1
ClinGenSTPG2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101410545
Clinical trialSTPG2-AS1
Miscellaneous
canSAR (ICR)STPG2-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSTPG2-AS1
EVEXSTPG2-AS1
GoPubMedSTPG2-AS1
iHOPSTPG2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:11:00 CET 2017

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