Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

STPG3-AS1 (STPG3 antisense RNA 1)

Identity

Other aliasC9orf173-AS1
HGNC (Hugo) STPG3-AS1
LocusID (NCBI) 100129722
Atlas_Id 78723
Location 9q34.3  [Link to chromosome band 9q34]
Location_base_pair Starts at 137250219 and ends at 137253497 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)STPG3-AS1   51176
Cards
Entrez_Gene (NCBI)STPG3-AS1  100129722  STPG3 antisense RNA 1
AliasesC9orf173-AS1
GeneCards (Weizmann)STPG3-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:137250219-137253497 [Contig_View]  STPG3-AS1 [Vega]
TCGA cBioPortalSTPG3-AS1
AceView (NCBI)STPG3-AS1
Genatlas (Paris)STPG3-AS1
WikiGenes100129722
SOURCE (Princeton)STPG3-AS1
Genetics Home Reference (NIH)STPG3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)STPG3-AS1  -     chr9:137250219-137253497 -  9q34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)STPG3-AS1  -     9q34.3   [Description]    (hg19-Feb_2009)
EnsemblSTPG3-AS1 - 9q34.3 [CytoView hg19]  STPG3-AS1 - 9q34.3 [CytoView hg38]
Mapping of homologs : NCBISTPG3-AS1 [Mapview hg19]  STPG3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097764 CB047271
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)STPG3-AS1
Cluster EST : UnigeneHs.656347 [ NCBI ]
CGAP (NCI)Hs.656347
Gene ExpressionSTPG3-AS1 [ NCBI-GEO ]   STPG3-AS1 [ EBI - ARRAY_EXPRESS ]   STPG3-AS1 [ SEEK ]   STPG3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)STPG3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100129722
GTEX Portal (Tissue expression)STPG3-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)STPG3-AS1
DMDM Disease mutations100129722
Blocks (Seattle)STPG3-AS1
IPIIPI00746236   
Protein Interaction databases
BioGRIDSTPG3-AS1
STRING (EMBL)STPG3-AS1
ZODIACSTPG3-AS1
Ontologies - Pathways
Huge Navigator STPG3-AS1 [HugePedia]
snp3D : Map Gene to Disease100129722
BioCentury BCIQSTPG3-AS1
ClinGenSTPG3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100129722
Clinical trialSTPG3-AS1
Miscellaneous
canSAR (ICR)STPG3-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSTPG3-AS1
EVEXSTPG3-AS1
GoPubMedSTPG3-AS1
iHOPSTPG3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:44:26 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.