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STRADA (STE20-related kinase adaptor alpha)

Identity

Other namesLYK5
NY-BR-96
PMSE
STRAD
Stlk
HGNC (Hugo) STRADA
LocusID (NCBI) 92335
Location 17q23.3
Location_base_pair Starts at 61780192 and ends at 61819330 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)STRADA   30172
Entrez_Gene (NCBI)STRADA  92335  STE20-related kinase adaptor alpha
Cards
GeneCards (Weizmann)STRADA
Ensembl (Hinxton)ENSG00000266173 [Gene_View]  chr17:61780192-61819330 [Contig_View]  STRADA [Vega]
AceView (NCBI)STRADA
Genatlas (Paris)STRADA
SOURCE (Stanford)NM_001003786 NM_001003787 NM_001003788 NM_001165969 NM_001165970 NM_153335
Genomic and cartography
GoldenPath (UCSC)STRADA  -  17q23.3   chr17:61780192-61819330 -  17q23.3   [Description]    (hg19-Feb_2009)
EnsemblSTRADA - 17q23.3 [CytoView]
Mapping of homologs : NCBISTRADA [Mapview]
OMIM608626   611087   
Gene and transcription
Genbank (Entrez)AF308302 AK074771 AK075005 AK128173 AK293160
RefSeq transcript (SRS)NM_001003786 NM_001003787 NM_001003788 NM_001165969 NM_001165970 NM_153335
RefSeq transcript (Entrez)NM_001003786 NM_001003787 NM_001003788 NM_001165969 NM_001165970 NM_153335
RefSeq genomic (SRS)AC_000149 NC_000017 NC_018928 NG_015817 NT_010783 NW_001838450 NW_004078092
RefSeq genomic (Entrez)AC_000149 NC_000017 NC_018928 NG_015817 NT_010783 NW_001838450 NW_004078092
Consensus coding sequences : CCDS (NCBI)STRADA
Cluster EST : UnigeneHs.514402 [ SRS ] Hs.514402 [ NCBI ]
CGAP (NCI)Hs.514402
Alternative Splicing : Fast-db (Paris)GSHG0013642
Alternative Splicing GalleryENSG00000266173
Gene ExpressionSTRADA [ NCBI-GEO ]   STRADA [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7RTN6 (SRS) Q7RTN6 (Uniprot)
NextProtQ7RTN6
With graphics : InterProQ7RTN6
Splice isoforms : SwissVarQ7RTN6(Swissvar)
Domaine pattern : Prosite (SRS)PROTEIN_KINASE_DOM (PS50011)   
Domaine pattern : Prosite (Expaxy)PROTEIN_KINASE_DOM (PS50011)   
Domains : Interpro (SRS)Kinase-like_dom    Prot_kinase_cat_dom   
Domains : Interpro (EBI)Kinase-like_dom    Prot_kinase_cat_dom   
Related proteins : CluSTrQ7RTN6
Domain families : Pfam (SRS)Pkinase (PF00069)   
Domain families : Pfam (Sanger)Pkinase (PF00069)   
Domain families : Pfam (NCBI)pfam00069   
DMDM92335
Blocks (Seattle)Q7RTN6
PDB (SRS)1UPK    2WTK    3GNI   
PDB (PDBSum)1UPK    2WTK    3GNI   
PDB (IMB)1UPK    2WTK    3GNI   
PDB (RSDB)1UPK    2WTK    3GNI   
Human Protein AtlasENSG00000266173
HPRD14332
IPIIPI00300700   IPI00396083   IPI00456673   IPI00873876   IPI00456050   IPI00947317   IPI00945374   
Protein Interaction databases
DIP (DOE-UCLA)Q7RTN6
IntAct (EBI)Q7RTN6
FunCoupENSG00000266173
REACTOMESTRADA
Protein Interaction Database92335
BioGRIDSTRADA
InParanoidQ7RTN6
Interologous Interaction database Q7RTN6
IntegromeDBSTRADA
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)STRADA
SNP (GeneSNP Utah)STRADA
SNP : HGBaseSTRADA
Genetic variants : HAPMAPSTRADA
Somatic Mutations in Cancer : COSMICSTRADA 
CONAN: Copy Number AnalysisSTRADA 
Mutations and Diseases : HGMDSTRADA
OMIM608626    611087   
GENETests608626    611087   
Disease Genetic AssociationSTRADA
Huge Navigator STRADA [HugePedia]  STRADA [HugeCancerGEM]
Genomic VariantsSTRADA  STRADA [DGVbeta]
snp3D : Map Gene to Disease92335
General knowledge
Homologs : HomoloGeneSTRADA
Homology/Alignments : Family Browser (UCSC)STRADA
Phylogenetic Trees/Animal Genes : TreeFamSTRADA
Chemical/Protein Interactions : CTD92335
Chemical/Pharm GKB GenePA164726342
Clinical trialSTRADA
Cancer Resource (Charite)ENSG00000266173
Ontology : AmiGOprotein kinase activity  protein serine/threonine kinase activity  protein binding  ATP binding  nucleus  cytoplasm  cytosol  protein phosphorylation  protein export from nucleus  cell cycle arrest  insulin receptor signaling pathway  kinase binding  protein kinase activator activity  activation of protein kinase activity  protein complex  regulation of fatty acid oxidation  protein heterooligomerization  
Ontology : EGO-EBIprotein kinase activity  protein serine/threonine kinase activity  protein binding  ATP binding  nucleus  cytoplasm  cytosol  protein phosphorylation  protein export from nucleus  cell cycle arrest  insulin receptor signaling pathway  kinase binding  protein kinase activator activity  activation of protein kinase activity  protein complex  regulation of fatty acid oxidation  protein heterooligomerization  
Pathways : KEGGmTOR signaling pathway
Other databases
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
PubGeneSTRADA
iHOPSTRADA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:24:45 CEST 2013
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