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STRAP (serine/threonine kinase receptor associated protein)

Identity

Other namesMAWD
PT-WD
UNRIP
HGNC (Hugo) STRAP
LocusID (NCBI) 11171
Location 12p12.3
Location_base_pair Starts at 16035288 and ends at 16056410 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)STRAP   30796
Entrez_Gene (NCBI)STRAP  11171  serine/threonine kinase receptor associated protein
Cards
GeneCards (Weizmann)STRAP
Ensembl (Hinxton)ENSG00000023734 [Gene_View]  chr12:16035288-16056410 [Contig_View]  STRAP [Vega]
AceView (NCBI)STRAP
Genatlas (Paris)STRAP
SOURCE (Stanford)NM_007178
Genomic and cartography
GoldenPath (UCSC)STRAP  -  12p12.3   chr12:16035288-16056410 +  12p12.3   [Description]    (hg19-Feb_2009)
EnsemblSTRAP - 12p12.3 [CytoView]
Mapping of homologs : NCBISTRAP [Mapview]
OMIM605986   
Gene and transcription
Genbank (Entrez)AB024327 AF161496 AJ010025 AK297942 AK312295
RefSeq transcript (SRS)NM_007178
RefSeq transcript (Entrez)NM_007178
RefSeq genomic (SRS)AC_000144 NC_000012 NC_018923 NT_009714 NW_001838052 NW_004078074
RefSeq genomic (Entrez)AC_000144 NC_000012 NC_018923 NT_009714 NW_001838052 NW_004078074
Consensus coding sequences : CCDS (NCBI)STRAP
Cluster EST : UnigeneHs.504895 [ SRS ] Hs.504895 [ NCBI ]
CGAP (NCI)Hs.504895
Alternative Splicing : Fast-db (Paris)GSHG0006510
Alternative Splicing GalleryENSG00000023734
Gene ExpressionSTRAP [ NCBI-GEO ]   STRAP [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y3F4 (SRS) Q9Y3F4 (Uniprot)
NextProtQ9Y3F4
With graphics : InterProQ9Y3F4
Splice isoforms : SwissVarQ9Y3F4(Swissvar)
Domaine pattern : Prosite (SRS)WD_REPEATS_1 (PS00678)    WD_REPEATS_2 (PS50082)    WD_REPEATS_REGION (PS50294)   
Domaine pattern : Prosite (Expaxy)WD_REPEATS_1 (PS00678)    WD_REPEATS_2 (PS50082)    WD_REPEATS_REGION (PS50294)   
Domains : Interpro (SRS)G-protein_beta_WD-40_rep    WD40/YVTN_repeat-like_dom    WD40_repeat    WD40_repeat_CS    WD40_repeat_dom   
Domains : Interpro (EBI)G-protein_beta_WD-40_rep    WD40/YVTN_repeat-like_dom    WD40_repeat    WD40_repeat_CS    WD40_repeat_dom   
Related proteins : CluSTrQ9Y3F4
Domain families : Pfam (SRS)WD40 (PF00400)   
Domain families : Pfam (Sanger)WD40 (PF00400)   
Domain families : Pfam (NCBI)pfam00400   
Domain families : Smart (EMBL)WD40 (SM00320)  
DMDM11171
Blocks (Seattle)Q9Y3F4
Human Protein AtlasENSG00000023734
HPRD05816
IPIIPI00941907   IPI01015342   IPI01013159   IPI00294536   IPI01011918   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y3F4
IntAct (EBI)Q9Y3F4
FunCoupENSG00000023734
REACTOMESTRAP
Protein Interaction Database11171
BioGRIDSTRAP
InParanoidQ9Y3F4
Interologous Interaction database Q9Y3F4
IntegromeDBSTRAP
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)STRAP
SNP (GeneSNP Utah)STRAP
SNP : HGBaseSTRAP
Genetic variants : HAPMAPSTRAP
Somatic Mutations in Cancer : COSMICSTRAP 
CONAN: Copy Number AnalysisSTRAP 
Mutations and Diseases : HGMDSTRAP
OMIM605986   
GENETests605986   
Disease Genetic AssociationSTRAP
Huge Navigator STRAP [HugePedia]  STRAP [HugeCancerGEM]
Genomic VariantsSTRAP  STRAP [DGVbeta]
snp3D : Map Gene to Disease11171
General knowledge
Homologs : HomoloGeneSTRAP
Homology/Alignments : Family Browser (UCSC)STRAP
Phylogenetic Trees/Animal Genes : TreeFamSTRAP
Chemical/Protein Interactions : CTD11171
Chemical/Pharm GKB GenePA134867032
Clinical trialSTRAP
Cancer Resource (Charite)ENSG00000023734
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  receptor binding  protein binding  nucleus  spliceosomal complex  cytoplasm  mitochondrion  cytosol  plasma membrane  mRNA processing  transforming growth factor beta receptor signaling pathway  RNA splicing  cell junction  negative regulation of transforming growth factor beta receptor signaling pathway  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  receptor binding  protein binding  nucleus  spliceosomal complex  cytoplasm  mitochondrion  cytosol  plasma membrane  mRNA processing  transforming growth factor beta receptor signaling pathway  RNA splicing  cell junction  negative regulation of transforming growth factor beta receptor signaling pathway  
Other databases
Probes
Litterature
PubMed45 Pubmed reference(s) in Entrez
PubGeneSTRAP
iHOPSTRAP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:49:10 CEST 2013
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