STRN3 (striatin, calmodulin binding protein 3)

Identity

Other names	SG2NA
HGNC	STRN3
Location	14q13-q21
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	STRN3   15720
Entrez_Gene	STRN3  29966  striatin, calmodulin binding protein 3
	Cards
GeneCards	STRN3
Ensembl	STRN3 [Search_View]   ENSG00000196792 [Gene_View]
Genatlas	STRN3
GeneLynx	STRN3
eGenome	STRN3
euGene	29966
	Genomic and cartography
GoldenPath	STRN3  -     chr14:30432756-30565358 -  14q12   [Description]    (hg18-March_2006)
Ensembl	STRN3 - 14q12 [CytoView]
NCBI	Mapview
HomoloGene	STRN3
	Gene and transcription
Genbank	AA572712 [ ENTREZ ]
Genbank	AF243424 [ ENTREZ ]
Genbank	AK290229 [ ENTREZ ]
Genbank	AK314041 [ ENTREZ ]
Genbank	AW070834 [ ENTREZ ]
RefSeq	NM_001083893 [ SRS ]    NM_001083893 [ ENTREZ ]
RefSeq	NM_014574 [ SRS ]    NM_014574 [ ENTREZ ]
RefSeq	AC_000057 [ SRS ]    AC_000057 [ ENTREZ ]
RefSeq	AC_000146 [ SRS ]    AC_000146 [ ENTREZ ]
RefSeq	NC_000014 [ SRS ]    NC_000014 [ ENTREZ ]
RefSeq	NT_026437 [ SRS ]    NT_026437 [ ENTREZ ]
RefSeq	NW_001838110 [ SRS ]    NW_001838110 [ ENTREZ ]
RefSeq	NW_925539 [ SRS ]    NW_925539 [ ENTREZ ]
AceView	STRN3 AceView - NCBI
Unigene	Hs.401843 [ SRS ]    Hs.401843 [ NCBI ]     HS401843 [ spliceNest ]
Fast-db	130 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q13033 [ SRS]    Q13033 [ EXPASY ]     Q13033 [ INTERPRO ]     Q13033 [ UNIPROT ]
Prosite	PS00678 WD_REPEATS_1 [ SRS ]    PS00678 WD_REPEATS_1 [ Expasy ]
Prosite	PS50082 WD_REPEATS_2 [ SRS ]    PS50082 WD_REPEATS_2 [ Expasy ]
Prosite	PS50294 WD_REPEATS_REGION [ SRS ]    PS50294 WD_REPEATS_REGION [ Expasy ]
Interpro	IPR013258 Striatin_N [ SRS ]    IPR013258 Striatin_N [ EBI ]
Interpro	IPR015943 WD40/YVTN_repeat-like [ SRS ]    IPR015943 WD40/YVTN_repeat-like [ EBI ]
Interpro	IPR001680 WD40_repeat [ SRS ]    IPR001680 WD40_repeat [ EBI ]
CluSTr	Q13033
Pfam	PF08232 Striatin [ SRS ]    PF08232 Striatin [ Sanger ]    pfam08232 [ NCBI-CDD ]
Pfam	PF00400 WD40 [ SRS ]    PF00400 WD40 [ Sanger ]    pfam00400 [ NCBI-CDD ]
Smart	SM00320 WD40 [EMBL]
Prodom	PD000018 WD40[INRA-Toulouse]
Prodom	Q13033 STRN3_HUMAN [ Domain structure ]   Q13033 STRN3_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	Q13033
HPRD	11613
	Protein Interaction databases
DIP	Q13033
IntAct	Q13033
	Polymorphism : SNP, mutations, diseases
SNP	STRN3 [dbSNP-NCBI]
SNP	NM_001083893 [SNP-NCI]
SNP	NM_014574 [SNP-NCI]
SNP	STRN3 [GeneSNPs - Utah]  STRN3] [HGBASE - SRS]
HAPMAP	STRN3 [HAPMAP]
COSMIC	STRN3 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	STRN3
	General knowledge
Family Browser	STRN3 [UCSC Family Browser]
SOURCE	NM_001083893
SOURCE	NM_014574
SMD	Hs.401843
SAGE	Hs.401843
GO	calmodulin binding [Amigo]  calmodulin binding
GO	membrane fraction [Amigo]  membrane fraction
GO	nucleus [Amigo]  nucleus
GO	cytoplasm [Amigo]  cytoplasm
GO	cytosol [Amigo]  cytosol
GO	cell cycle [Amigo]  cell cycle
GO	membrane [Amigo]  membrane
PubGene	STRN3
TreeFam	STRN3
CTD	29966 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	STRN3 Related clones (RZPD - Berlin)
	PubMed
PubMed	11 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:33:55 2008