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STX16-NPEPL1 (STX16-NPEPL1 readthrough (NMD candidate))

Identity

Other alias-
HGNC (Hugo) STX16-NPEPL1
LocusID (NCBI) 100534593
Atlas_Id 74333
Location 20q13.32  [Link to chromosome band 20q13]
Location_base_pair Starts at 58651253 and ends at 58715844 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)STX16-NPEPL1   41993
Cards
Entrez_Gene (NCBI)STX16-NPEPL1  100534593  STX16-NPEPL1 readthrough (NMD candidate)
Aliases
GeneCards (Weizmann)STX16-NPEPL1
Ensembl hg19 (Hinxton)ENSG00000254995 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000254995 [Gene_View]  chr20:58651253-58715844 [Contig_View]  STX16-NPEPL1 [Vega]
ICGC DataPortalENSG00000254995
TCGA cBioPortalSTX16-NPEPL1
AceView (NCBI)STX16-NPEPL1
Genatlas (Paris)STX16-NPEPL1
WikiGenes100534593
SOURCE (Princeton)STX16-NPEPL1
Genetics Home Reference (NIH)STX16-NPEPL1
Genomic and cartography
GoldenPath hg38 (UCSC)STX16-NPEPL1  -     chr20:58651253-58715844 +  20q13.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)STX16-NPEPL1  -     20q13.32   [Description]    (hg19-Feb_2009)
EnsemblSTX16-NPEPL1 - 20q13.32 [CytoView hg19]  STX16-NPEPL1 - 20q13.32 [CytoView hg38]
Mapping of homologs : NCBISTX16-NPEPL1 [Mapview hg19]  STX16-NPEPL1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB209296
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)STX16-NPEPL1
Cluster EST : UnigeneHs.654868 [ NCBI ]
CGAP (NCI)Hs.654868
Alternative Splicing GalleryENSG00000254995
Gene ExpressionSTX16-NPEPL1 [ NCBI-GEO ]   STX16-NPEPL1 [ EBI - ARRAY_EXPRESS ]   STX16-NPEPL1 [ SEEK ]   STX16-NPEPL1 [ MEM ]
Gene Expression Viewer (FireBrowse)STX16-NPEPL1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100534593
GTEX Portal (Tissue expression)STX16-NPEPL1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)STX16-NPEPL1
DMDM Disease mutations100534593
Blocks (Seattle)STX16-NPEPL1
Human Protein AtlasENSG00000254995
IPIIPI00023149   IPI00220261   IPI00414290   IPI00220263   IPI00744349   IPI00798248   IPI00746941   IPI00981423   IPI00386859   IPI00514263   IPI00556430   IPI00748594   IPI00795006   IPI00795939   IPI00794054   IPI00794656   IPI00744456   IPI00977307   IPI01009999   IPI00976174   IPI00983303   IPI01011646   
Protein Interaction databases
FunCoupENSG00000254995
BioGRIDSTX16-NPEPL1
STRING (EMBL)STX16-NPEPL1
ZODIACSTX16-NPEPL1
Ontologies - Pathways
Huge Navigator STX16-NPEPL1 [HugePedia]
snp3D : Map Gene to Disease100534593
BioCentury BCIQSTX16-NPEPL1
ClinGenSTX16-NPEPL1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100534593
Clinical trialSTX16-NPEPL1
Miscellaneous
canSAR (ICR)STX16-NPEPL1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSTX16-NPEPL1
EVEXSTX16-NPEPL1
GoPubMedSTX16-NPEPL1
iHOPSTX16-NPEPL1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:44:28 CEST 2017

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