Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

STX17-AS1 (STX17 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) STX17-AS1
LocusID (NCBI) 441461
Atlas_Id 74334
Location 9q31.1  [Link to chromosome band 9q31]
Location_base_pair Starts at 99886318 and ends at 99906601 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)STX17-AS1   51174
Cards
Entrez_Gene (NCBI)STX17-AS1  441461  STX17 antisense RNA 1
Aliases
GeneCards (Weizmann)STX17-AS1
Ensembl hg19 (Hinxton)ENSG00000255145 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255145 [Gene_View]  chr9:99886318-99906601 [Contig_View]  STX17-AS1 [Vega]
ICGC DataPortalENSG00000255145
TCGA cBioPortalSTX17-AS1
AceView (NCBI)STX17-AS1
Genatlas (Paris)STX17-AS1
WikiGenes441461
SOURCE (Princeton)STX17-AS1
Genetics Home Reference (NIH)STX17-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)STX17-AS1  -     chr9:99886318-99906601 -  9q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)STX17-AS1  -     9q31.1   [Description]    (hg19-Feb_2009)
EnsemblSTX17-AS1 - 9q31.1 [CytoView hg19]  STX17-AS1 - 9q31.1 [CytoView hg38]
Mapping of homologs : NCBISTX17-AS1 [Mapview hg19]  STX17-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC030123 BG460404
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)STX17-AS1
Cluster EST : UnigeneHs.163155 [ NCBI ]
CGAP (NCI)Hs.163155
Alternative Splicing GalleryENSG00000255145
Gene ExpressionSTX17-AS1 [ NCBI-GEO ]   STX17-AS1 [ EBI - ARRAY_EXPRESS ]   STX17-AS1 [ SEEK ]   STX17-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)STX17-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)441461
GTEX Portal (Tissue expression)STX17-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)STX17-AS1
DMDM Disease mutations441461
Blocks (Seattle)STX17-AS1
Human Protein AtlasENSG00000255145
Protein Interaction databases
FunCoupENSG00000255145
BioGRIDSTX17-AS1
STRING (EMBL)STX17-AS1
ZODIACSTX17-AS1
Ontologies - Pathways
Huge Navigator STX17-AS1 [HugePedia]
snp3D : Map Gene to Disease441461
BioCentury BCIQSTX17-AS1
ClinGenSTX17-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD441461
Clinical trialSTX17-AS1
Miscellaneous
canSAR (ICR)STX17-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSTX17-AS1
EVEXSTX17-AS1
GoPubMedSTX17-AS1
iHOPSTX17-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:44:28 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.