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STX18-IT1 (STX18 intronic transcript 1)

Identity

Alias_namesSTX18 intronic transcript 1 (non-protein coding)
Other alias-
HGNC (Hugo) STX18-IT1
LocusID (NCBI) 104472519
Atlas_Id 77367
Location 4p16.3  [Link to chromosome band 4p16]
Location_base_pair Starts at 4477848 and ends at 4483427 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)STX18-IT1   41415
Cards
Entrez_Gene (NCBI)STX18-IT1  104472519  STX18 intronic transcript 1
Aliases
GeneCards (Weizmann)STX18-IT1
Ensembl hg19 (Hinxton) [Gene_View]  chr4:4477848-4483427 [Contig_View]  STX18-IT1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:4477848-4483427 [Contig_View]  STX18-IT1 [Vega]
TCGA cBioPortalSTX18-IT1
AceView (NCBI)STX18-IT1
Genatlas (Paris)STX18-IT1
WikiGenes104472519
SOURCE (Princeton)STX18-IT1
Genetics Home Reference (NIH)STX18-IT1
Genomic and cartography
GoldenPath hg19 (UCSC)STX18-IT1  -     chr4:4477848-4483427 -  4p16.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)STX18-IT1  -     4p16.3   [Description]    (hg38-Dec_2013)
EnsemblSTX18-IT1 - 4p16.3 [CytoView hg19]  STX18-IT1 - 4p16.3 [CytoView hg38]
Mapping of homologs : NCBISTX18-IT1 [Mapview hg19]  STX18-IT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB060204 HG496688
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_006051 NW_004929314
Consensus coding sequences : CCDS (NCBI)STX18-IT1
Cluster EST : UnigeneHs.691848 [ NCBI ]
CGAP (NCI)Hs.691848
Gene ExpressionSTX18-IT1 [ NCBI-GEO ]   STX18-IT1 [ EBI - ARRAY_EXPRESS ]   STX18-IT1 [ SEEK ]   STX18-IT1 [ MEM ]
Gene Expression Viewer (FireBrowse)STX18-IT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104472519
GTEX Portal (Tissue expression)STX18-IT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)STX18-IT1
DMDM Disease mutations104472519
Blocks (Seattle)STX18-IT1
Protein Interaction databases
BioGRIDSTX18-IT1
STRING (EMBL)STX18-IT1
ZODIACSTX18-IT1
Ontologies - Pathways
Huge Navigator STX18-IT1 [HugePedia]
snp3D : Map Gene to Disease104472519
BioCentury BCIQSTX18-IT1
ClinGenSTX18-IT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104472519
Clinical trialSTX18-IT1
Miscellaneous
canSAR (ICR)STX18-IT1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSTX18-IT1
EVEXSTX18-IT1
GoPubMedSTX18-IT1
iHOPSTX18-IT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:47:01 CET 2017

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