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STXBP5-AS1 (STXBP5 antisense RNA 1)

Identity

Alias_namesSTXBP5 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) STXBP5-AS1
LocusID (NCBI) 729178
Atlas_Id 74347
Location 6q24.3  [Link to chromosome band 6q24]
Location_base_pair Starts at 146841389 and ends at 147204614 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)STXBP5-AS1   44183
Cards
Entrez_Gene (NCBI)STXBP5-AS1  729178  STXBP5 antisense RNA 1
Aliases
GeneCards (Weizmann)STXBP5-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:146841389-147204614 [Contig_View]  STXBP5-AS1 [Vega]
TCGA cBioPortalSTXBP5-AS1
AceView (NCBI)STXBP5-AS1
Genatlas (Paris)STXBP5-AS1
WikiGenes729178
SOURCE (Princeton)STXBP5-AS1
Genetics Home Reference (NIH)STXBP5-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)STXBP5-AS1  -     chr6:146841389-147204614 -  6q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)STXBP5-AS1  -     6q24.3   [Description]    (hg19-Feb_2009)
EnsemblSTXBP5-AS1 - 6q24.3 [CytoView hg19]  STXBP5-AS1 - 6q24.3 [CytoView hg38]
Mapping of homologs : NCBISTXBP5-AS1 [Mapview hg19]  STXBP5-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091594 AK125216 BC035182 BC044307 BQ269903
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)STXBP5-AS1
Cluster EST : UnigeneHs.557608 [ NCBI ]
CGAP (NCI)Hs.557608
Gene ExpressionSTXBP5-AS1 [ NCBI-GEO ]   STXBP5-AS1 [ EBI - ARRAY_EXPRESS ]   STXBP5-AS1 [ SEEK ]   STXBP5-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)STXBP5-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)729178
GTEX Portal (Tissue expression)STXBP5-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)STXBP5-AS1
DMDM Disease mutations729178
Blocks (Seattle)STXBP5-AS1
IPIIPI00884439   
Protein Interaction databases
BioGRIDSTXBP5-AS1
STRING (EMBL)STXBP5-AS1
ZODIACSTXBP5-AS1
Ontologies - Pathways
Huge Navigator STXBP5-AS1 [HugePedia]
snp3D : Map Gene to Disease729178
BioCentury BCIQSTXBP5-AS1
ClinGenSTXBP5-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729178
Clinical trialSTXBP5-AS1
Miscellaneous
canSAR (ICR)STXBP5-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSTXBP5-AS1
EVEXSTXBP5-AS1
GoPubMedSTXBP5-AS1
iHOPSTXBP5-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:33:38 CEST 2018

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