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SUCNR1 (succinate receptor 1)

Identity

Alias_namesGPR91
G protein-coupled receptor 91
Other alias
HGNC (Hugo) SUCNR1
LocusID (NCBI) 56670
Atlas_Id 56511
Location 3q25.1  [Link to chromosome band 3q25]
Location_base_pair Starts at 151873643 and ends at 151884619 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
RASA2 (3q23) / SUCNR1 (3q25.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SUCNR1   4542
Cards
Entrez_Gene (NCBI)SUCNR1  56670  succinate receptor 1
AliasesGPR91
GeneCards (Weizmann)SUCNR1
Ensembl hg19 (Hinxton)ENSG00000198829 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198829 [Gene_View]  chr3:151873643-151884619 [Contig_View]  SUCNR1 [Vega]
ICGC DataPortalENSG00000198829
TCGA cBioPortalSUCNR1
AceView (NCBI)SUCNR1
Genatlas (Paris)SUCNR1
WikiGenes56670
SOURCE (Princeton)SUCNR1
Genetics Home Reference (NIH)SUCNR1
Genomic and cartography
GoldenPath hg38 (UCSC)SUCNR1  -     chr3:151873643-151884619 +  3q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SUCNR1  -     3q25.1   [Description]    (hg19-Feb_2009)
EnsemblSUCNR1 - 3q25.1 [CytoView hg19]  SUCNR1 - 3q25.1 [CytoView hg38]
Mapping of homologs : NCBISUCNR1 [Mapview hg19]  SUCNR1 [Mapview hg38]
OMIM606381   
Gene and transcription
Genbank (Entrez)AF247785 AF348078 AK290420 BC030948 BI031507
RefSeq transcript (Entrez)NM_033050
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SUCNR1
Cluster EST : UnigeneHs.627102 [ NCBI ]
CGAP (NCI)Hs.627102
Alternative Splicing GalleryENSG00000198829
Gene ExpressionSUCNR1 [ NCBI-GEO ]   SUCNR1 [ EBI - ARRAY_EXPRESS ]   SUCNR1 [ SEEK ]   SUCNR1 [ MEM ]
Gene Expression Viewer (FireBrowse)SUCNR1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56670
GTEX Portal (Tissue expression)SUCNR1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BXA5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BXA5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BXA5
Splice isoforms : SwissVarQ9BXA5
PhosPhoSitePlusQ9BXA5
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)SUCNR1
DMDM Disease mutations56670
Blocks (Seattle)SUCNR1
SuperfamilyQ9BXA5
Human Protein AtlasENSG00000198829
Peptide AtlasQ9BXA5
HPRD16211
IPIIPI00011451   
Protein Interaction databases
DIP (DOE-UCLA)Q9BXA5
IntAct (EBI)Q9BXA5
FunCoupENSG00000198829
BioGRIDSUCNR1
STRING (EMBL)SUCNR1
ZODIACSUCNR1
Ontologies - Pathways
QuickGOQ9BXA5
Ontology : AmiGOG-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  biological_process  integral component of membrane  extracellular exosome  
Ontology : EGO-EBIG-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  biological_process  integral component of membrane  extracellular exosome  
NDEx NetworkSUCNR1
Atlas of Cancer Signalling NetworkSUCNR1
Wikipedia pathwaysSUCNR1
Orthology - Evolution
OrthoDB56670
GeneTree (enSembl)ENSG00000198829
Phylogenetic Trees/Animal Genes : TreeFamSUCNR1
HOVERGENQ9BXA5
HOGENOMQ9BXA5
Homologs : HomoloGeneSUCNR1
Homology/Alignments : Family Browser (UCSC)SUCNR1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSUCNR1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SUCNR1
dbVarSUCNR1
ClinVarSUCNR1
1000_GenomesSUCNR1 
Exome Variant ServerSUCNR1
ExAC (Exome Aggregation Consortium)SUCNR1 (select the gene name)
Genetic variants : HAPMAP56670
Genomic Variants (DGV)SUCNR1 [DGVbeta]
DECIPHERSUCNR1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSUCNR1 
Mutations
ICGC Data PortalSUCNR1 
TCGA Data PortalSUCNR1 
Broad Tumor PortalSUCNR1
OASIS PortalSUCNR1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSUCNR1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSUCNR1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch SUCNR1
DgiDB (Drug Gene Interaction Database)SUCNR1
DoCM (Curated mutations)SUCNR1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SUCNR1 (select a term)
intoGenSUCNR1
Cancer3DSUCNR1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606381   
Orphanet
MedgenSUCNR1
Genetic Testing Registry SUCNR1
NextProtQ9BXA5 [Medical]
TSGene56670
GENETestsSUCNR1
Target ValidationSUCNR1
Huge Navigator SUCNR1 [HugePedia]
snp3D : Map Gene to Disease56670
BioCentury BCIQSUCNR1
ClinGenSUCNR1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56670
Chemical/Pharm GKB GenePA28934
Clinical trialSUCNR1
Miscellaneous
canSAR (ICR)SUCNR1 (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSUCNR1
EVEXSUCNR1
GoPubMedSUCNR1
iHOPSUCNR1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:33:42 CEST 2017

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