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SULT1E1 (sulfotransferase family 1E member 1)

Identity

Alias_namesSTE
sulfotransferase, estrogen-preferring
sulfotransferase family 1E, estrogen-preferring, member 1
Alias_symbol (synonym)EST
Other aliasEST-1
ST1E1
HGNC (Hugo) SULT1E1
LocusID (NCBI) 6783
Atlas_Id 42450
Location 4q13.3  [Link to chromosome band 4q13]
Location_base_pair Starts at 70706930 and ends at 70725870 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SULT1E1   11377
Cards
Entrez_Gene (NCBI)SULT1E1  6783  sulfotransferase family 1E member 1
AliasesEST; EST-1; ST1E1; STE
GeneCards (Weizmann)SULT1E1
Ensembl hg19 (Hinxton)ENSG00000109193 [Gene_View]  chr4:70706930-70725870 [Contig_View]  SULT1E1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000109193 [Gene_View]  chr4:70706930-70725870 [Contig_View]  SULT1E1 [Vega]
ICGC DataPortalENSG00000109193
TCGA cBioPortalSULT1E1
AceView (NCBI)SULT1E1
Genatlas (Paris)SULT1E1
WikiGenes6783
SOURCE (Princeton)SULT1E1
Genetics Home Reference (NIH)SULT1E1
Genomic and cartography
GoldenPath hg19 (UCSC)SULT1E1  -     chr4:70706930-70725870 -  4q13.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SULT1E1  -     4q13.3   [Description]    (hg38-Dec_2013)
EnsemblSULT1E1 - 4q13.3 [CytoView hg19]  SULT1E1 - 4q13.3 [CytoView hg38]
Mapping of homologs : NCBISULT1E1 [Mapview hg19]  SULT1E1 [Mapview hg38]
OMIM600043   
Gene and transcription
Genbank (Entrez)AK310845 AK312236 BC027956 CR407621 S77383
RefSeq transcript (Entrez)NM_005420
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_016354 NW_004929320
Consensus coding sequences : CCDS (NCBI)SULT1E1
Cluster EST : UnigeneHs.479898 [ NCBI ]
CGAP (NCI)Hs.479898
Alternative Splicing GalleryENSG00000109193
Gene ExpressionSULT1E1 [ NCBI-GEO ]   SULT1E1 [ EBI - ARRAY_EXPRESS ]   SULT1E1 [ SEEK ]   SULT1E1 [ MEM ]
Gene Expression Viewer (FireBrowse)SULT1E1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6783
GTEX Portal (Tissue expression)SULT1E1
Protein : pattern, domain, 3D structure
UniProt/SwissProtP49888   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP49888  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP49888
Splice isoforms : SwissVarP49888
Catalytic activity : Enzyme2.8.2.4 [ Enzyme-Expasy ]   2.8.2.42.8.2.4 [ IntEnz-EBI ]   2.8.2.4 [ BRENDA ]   2.8.2.4 [ KEGG ]   
PhosPhoSitePlusP49888
Domains : Interpro (EBI)P-loop_NTPase    Sulfotransferase_dom   
Domain families : Pfam (Sanger)Sulfotransfer_1 (PF00685)   
Domain families : Pfam (NCBI)pfam00685   
Conserved Domain (NCBI)SULT1E1
DMDM Disease mutations6783
Blocks (Seattle)SULT1E1
PDB (SRS)1G3M    1HY3    4JVL    4JVM    4JVN   
PDB (PDBSum)1G3M    1HY3    4JVL    4JVM    4JVN   
PDB (IMB)1G3M    1HY3    4JVL    4JVM    4JVN   
PDB (RSDB)1G3M    1HY3    4JVL    4JVM    4JVN   
Structural Biology KnowledgeBase1G3M    1HY3    4JVL    4JVM    4JVN   
SCOP (Structural Classification of Proteins)1G3M    1HY3    4JVL    4JVM    4JVN   
CATH (Classification of proteins structures)1G3M    1HY3    4JVL    4JVM    4JVN   
SuperfamilyP49888
Human Protein AtlasENSG00000109193
Peptide AtlasP49888
HPRD08966
IPIIPI00028623   IPI00966266   
Protein Interaction databases
DIP (DOE-UCLA)P49888
IntAct (EBI)P49888
FunCoupENSG00000109193
BioGRIDSULT1E1
STRING (EMBL)SULT1E1
ZODIACSULT1E1
Ontologies - Pathways
QuickGOP49888
Ontology : AmiGOaryl sulfotransferase activity  estrone sulfotransferase activity  steroid binding  protein binding  cytosol  sulfotransferase activity  steroid metabolic process  estrogen metabolic process  positive regulation of fat cell differentiation  flavonol 3-sulfotransferase activity  steroid sulfotransferase activity  steroid sulfotransferase activity  3'-phosphoadenosine 5'-phosphosulfate metabolic process  sulfation  
Ontology : EGO-EBIaryl sulfotransferase activity  estrone sulfotransferase activity  steroid binding  protein binding  cytosol  sulfotransferase activity  steroid metabolic process  estrogen metabolic process  positive regulation of fat cell differentiation  flavonol 3-sulfotransferase activity  steroid sulfotransferase activity  steroid sulfotransferase activity  3'-phosphoadenosine 5'-phosphosulfate metabolic process  sulfation  
Pathways : KEGGSteroid hormone biosynthesis   
NDEx NetworkSULT1E1
Atlas of Cancer Signalling NetworkSULT1E1
Wikipedia pathwaysSULT1E1
Orthology - Evolution
OrthoDB6783
GeneTree (enSembl)ENSG00000109193
Phylogenetic Trees/Animal Genes : TreeFamSULT1E1
HOVERGENP49888
HOGENOMP49888
Homologs : HomoloGeneSULT1E1
Homology/Alignments : Family Browser (UCSC)SULT1E1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSULT1E1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SULT1E1
dbVarSULT1E1
ClinVarSULT1E1
1000_GenomesSULT1E1 
Exome Variant ServerSULT1E1
ExAC (Exome Aggregation Consortium)SULT1E1 (select the gene name)
Genetic variants : HAPMAP6783
Genomic Variants (DGV)SULT1E1 [DGVbeta]
DECIPHER (Syndromes)4:70706930-70725870  ENSG00000109193
CONAN: Copy Number AnalysisSULT1E1 
Mutations
ICGC Data PortalSULT1E1 
TCGA Data PortalSULT1E1 
Broad Tumor PortalSULT1E1
OASIS PortalSULT1E1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSULT1E1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSULT1E1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch SULT1E1
DgiDB (Drug Gene Interaction Database)SULT1E1
DoCM (Curated mutations)SULT1E1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SULT1E1 (select a term)
intoGenSULT1E1
Cancer3DSULT1E1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM600043   
Orphanet
MedgenSULT1E1
Genetic Testing Registry SULT1E1
NextProtP49888 [Medical]
TSGene6783
GENETestsSULT1E1
Huge Navigator SULT1E1 [HugePedia]
snp3D : Map Gene to Disease6783
BioCentury BCIQSULT1E1
ClinGenSULT1E1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6783
Chemical/Pharm GKB GenePA340
Clinical trialSULT1E1
Miscellaneous
canSAR (ICR)SULT1E1 (select the gene name)
Probes
Litterature
PubMed67 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSULT1E1
EVEXSULT1E1
GoPubMedSULT1E1
iHOPSULT1E1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:29:53 CET 2017

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