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SUN2 (Sad1 and UNC84 domain containing 2)

Identity

Alias_namesUNC84B
unc-84 homolog B (C. elegans)
Other alias
HGNC (Hugo) SUN2
LocusID (NCBI) 25777
Atlas_Id 55222
Location 22q13.1  [Link to chromosome band 22q13]
Location_base_pair Starts at 38734714 and ends at 38756019 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SUN2 (22q13.1) / MED10 (5p15.31)SUN2 (22q13.1) / THBS1 (15q14)SUN2 (22q13.1) / ULK1 (12q24.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SUN2   14210
Cards
Entrez_Gene (NCBI)SUN2  25777  Sad1 and UNC84 domain containing 2
AliasesUNC84B
GeneCards (Weizmann)SUN2
Ensembl hg19 (Hinxton)ENSG00000100242 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000100242 [Gene_View]  chr22:38734714-38756019 [Contig_View]  SUN2 [Vega]
ICGC DataPortalENSG00000100242
TCGA cBioPortalSUN2
AceView (NCBI)SUN2
Genatlas (Paris)SUN2
WikiGenes25777
SOURCE (Princeton)SUN2
Genetics Home Reference (NIH)SUN2
Genomic and cartography
GoldenPath hg38 (UCSC)SUN2  -     chr22:38734714-38756019 -  22q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SUN2  -     22q13.1   [Description]    (hg19-Feb_2009)
EnsemblSUN2 - 22q13.1 [CytoView hg19]  SUN2 - 22q13.1 [CytoView hg38]
Mapping of homologs : NCBISUN2 [Mapview hg19]  SUN2 [Mapview hg38]
OMIM613569   
Gene and transcription
Genbank (Entrez)AB014568 AF038178 AF202723 AK295787 AK304188
RefSeq transcript (Entrez)NM_001199579 NM_001199580 NM_015374
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SUN2
Cluster EST : UnigeneHs.744734 [ NCBI ]
CGAP (NCI)Hs.744734
Alternative Splicing GalleryENSG00000100242
Gene ExpressionSUN2 [ NCBI-GEO ]   SUN2 [ EBI - ARRAY_EXPRESS ]   SUN2 [ SEEK ]   SUN2 [ MEM ]
Gene Expression Viewer (FireBrowse)SUN2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)25777
GTEX Portal (Tissue expression)SUN2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UH99   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UH99  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UH99
Splice isoforms : SwissVarQ9UH99
PhosPhoSitePlusQ9UH99
Domaine pattern : Prosite (Expaxy)SUN (PS51469)   
Domains : Interpro (EBI)SUN2    SUN_dom   
Domain families : Pfam (Sanger)Sad1_UNC (PF07738)   
Domain families : Pfam (NCBI)pfam07738   
Conserved Domain (NCBI)SUN2
DMDM Disease mutations25777
Blocks (Seattle)SUN2
PDB (SRS)3UNP    4DXR    4DXS    4DXT    4FI9   
PDB (PDBSum)3UNP    4DXR    4DXS    4DXT    4FI9   
PDB (IMB)3UNP    4DXR    4DXS    4DXT    4FI9   
PDB (RSDB)3UNP    4DXR    4DXS    4DXT    4FI9   
Structural Biology KnowledgeBase3UNP    4DXR    4DXS    4DXT    4FI9   
SCOP (Structural Classification of Proteins)3UNP    4DXR    4DXS    4DXT    4FI9   
CATH (Classification of proteins structures)3UNP    4DXR    4DXS    4DXT    4FI9   
SuperfamilyQ9UH99
Human Protein AtlasENSG00000100242
Peptide AtlasQ9UH99
HPRD15611
IPIIPI00941110   IPI00295940   IPI00879581   IPI00877626   IPI00878697   IPI00879539   IPI00879049   IPI00879752   IPI00879400   IPI00879913   IPI00878145   
Protein Interaction databases
DIP (DOE-UCLA)Q9UH99
IntAct (EBI)Q9UH99
FunCoupENSG00000100242
BioGRIDSUN2
STRING (EMBL)SUN2
ZODIACSUN2
Ontologies - Pathways
QuickGOQ9UH99
Ontology : AmiGOnuclear chromosome, telomeric region  condensed nuclear chromosome  protein binding  lamin binding  nuclear envelope  nuclear envelope  integral component of nuclear inner membrane  nuclear envelope organization  mitotic spindle organization  nuclear migration  microtubule binding  endosome membrane  nucleokinesis involved in cell motility in cerebral cortex radial glia guided migration  positive regulation of cell migration  nuclear migration along microfilament  nuclear membrane  LINC complex  identical protein binding  meiotic cell cycle  centrosome localization  cytoskeletal anchoring at nuclear membrane  nuclear matrix anchoring at nuclear membrane  
Ontology : EGO-EBInuclear chromosome, telomeric region  condensed nuclear chromosome  protein binding  lamin binding  nuclear envelope  nuclear envelope  integral component of nuclear inner membrane  nuclear envelope organization  mitotic spindle organization  nuclear migration  microtubule binding  endosome membrane  nucleokinesis involved in cell motility in cerebral cortex radial glia guided migration  positive regulation of cell migration  nuclear migration along microfilament  nuclear membrane  LINC complex  identical protein binding  meiotic cell cycle  centrosome localization  cytoskeletal anchoring at nuclear membrane  nuclear matrix anchoring at nuclear membrane  
NDEx NetworkSUN2
Atlas of Cancer Signalling NetworkSUN2
Wikipedia pathwaysSUN2
Orthology - Evolution
OrthoDB25777
GeneTree (enSembl)ENSG00000100242
Phylogenetic Trees/Animal Genes : TreeFamSUN2
HOVERGENQ9UH99
HOGENOMQ9UH99
Homologs : HomoloGeneSUN2
Homology/Alignments : Family Browser (UCSC)SUN2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSUN2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SUN2
dbVarSUN2
ClinVarSUN2
1000_GenomesSUN2 
Exome Variant ServerSUN2
ExAC (Exome Aggregation Consortium)SUN2 (select the gene name)
Genetic variants : HAPMAP25777
Genomic Variants (DGV)SUN2 [DGVbeta]
DECIPHERSUN2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSUN2 
Mutations
ICGC Data PortalSUN2 
TCGA Data PortalSUN2 
Broad Tumor PortalSUN2
OASIS PortalSUN2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSUN2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSUN2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch SUN2
DgiDB (Drug Gene Interaction Database)SUN2
DoCM (Curated mutations)SUN2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SUN2 (select a term)
intoGenSUN2
Cancer3DSUN2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613569   
Orphanet
MedgenSUN2
Genetic Testing Registry SUN2
NextProtQ9UH99 [Medical]
TSGene25777
GENETestsSUN2
Target ValidationSUN2
Huge Navigator SUN2 [HugePedia]
snp3D : Map Gene to Disease25777
BioCentury BCIQSUN2
ClinGenSUN2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD25777
Chemical/Pharm GKB GenePA165378369
Clinical trialSUN2
Miscellaneous
canSAR (ICR)SUN2 (select the gene name)
Probes
Litterature
PubMed57 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSUN2
EVEXSUN2
GoPubMedSUN2
iHOPSUN2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:58:10 CEST 2017

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