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SUN3 (Sad1 and UNC84 domain containing 3)

Identity

Alias_namesSUNC1
Sad1 and UNC84 domain containing 1
Alias_symbol (synonym)MGC33329
Other alias
HGNC (Hugo) SUN3
LocusID (NCBI) 256979
Atlas_Id 74378
Location 7p12.3  [Link to chromosome band 7p12]
Location_base_pair Starts at 47987149 and ends at 48029119 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SUN3   22429
Cards
Entrez_Gene (NCBI)SUN3  256979  Sad1 and UNC84 domain containing 3
AliasesSUNC1
GeneCards (Weizmann)SUN3
Ensembl hg19 (Hinxton)ENSG00000164744 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164744 [Gene_View]  chr7:47987149-48029119 [Contig_View]  SUN3 [Vega]
ICGC DataPortalENSG00000164744
TCGA cBioPortalSUN3
AceView (NCBI)SUN3
Genatlas (Paris)SUN3
WikiGenes256979
SOURCE (Princeton)SUN3
Genetics Home Reference (NIH)SUN3
Genomic and cartography
GoldenPath hg38 (UCSC)SUN3  -     chr7:47987149-48029119 -  7p12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SUN3  -     7p12.3   [Description]    (hg19-Feb_2009)
EnsemblSUN3 - 7p12.3 [CytoView hg19]  SUN3 - 7p12.3 [CytoView hg38]
Mapping of homologs : NCBISUN3 [Mapview hg19]  SUN3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF429967 AI222206 AK302011 BC026189 BG772576
RefSeq transcript (Entrez)NM_001030019 NM_001284350 NM_152782
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SUN3
Cluster EST : UnigeneHs.406741 [ NCBI ]
CGAP (NCI)Hs.406741
Alternative Splicing GalleryENSG00000164744
Gene ExpressionSUN3 [ NCBI-GEO ]   SUN3 [ EBI - ARRAY_EXPRESS ]   SUN3 [ SEEK ]   SUN3 [ MEM ]
Gene Expression Viewer (FireBrowse)SUN3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)256979
GTEX Portal (Tissue expression)SUN3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TAQ9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TAQ9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TAQ9
Splice isoforms : SwissVarQ8TAQ9
PhosPhoSitePlusQ8TAQ9
Domaine pattern : Prosite (Expaxy)SUN (PS51469)   
Domains : Interpro (EBI)SUN3    SUN_dom   
Domain families : Pfam (Sanger)Sad1_UNC (PF07738)   
Domain families : Pfam (NCBI)pfam07738   
Conserved Domain (NCBI)SUN3
DMDM Disease mutations256979
Blocks (Seattle)SUN3
SuperfamilyQ8TAQ9
Human Protein AtlasENSG00000164744
Peptide AtlasQ8TAQ9
HPRD15451
IPIIPI00413626   IPI00940737   IPI00876925   IPI00927419   IPI00927630   IPI00924501   
Protein Interaction databases
DIP (DOE-UCLA)Q8TAQ9
IntAct (EBI)Q8TAQ9
FunCoupENSG00000164744
BioGRIDSUN3
STRING (EMBL)SUN3
ZODIACSUN3
Ontologies - Pathways
QuickGOQ8TAQ9
Ontology : AmiGOnuclear envelope  nuclear inner membrane  nuclear envelope organization  integral component of membrane  LINC complex  cytoskeletal anchoring at nuclear membrane  
Ontology : EGO-EBInuclear envelope  nuclear inner membrane  nuclear envelope organization  integral component of membrane  LINC complex  cytoskeletal anchoring at nuclear membrane  
NDEx NetworkSUN3
Atlas of Cancer Signalling NetworkSUN3
Wikipedia pathwaysSUN3
Orthology - Evolution
OrthoDB256979
GeneTree (enSembl)ENSG00000164744
Phylogenetic Trees/Animal Genes : TreeFamSUN3
HOVERGENQ8TAQ9
HOGENOMQ8TAQ9
Homologs : HomoloGeneSUN3
Homology/Alignments : Family Browser (UCSC)SUN3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSUN3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SUN3
dbVarSUN3
ClinVarSUN3
1000_GenomesSUN3 
Exome Variant ServerSUN3
ExAC (Exome Aggregation Consortium)SUN3 (select the gene name)
Genetic variants : HAPMAP256979
Genomic Variants (DGV)SUN3 [DGVbeta]
DECIPHERSUN3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSUN3 
Mutations
ICGC Data PortalSUN3 
TCGA Data PortalSUN3 
Broad Tumor PortalSUN3
OASIS PortalSUN3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSUN3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSUN3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch SUN3
DgiDB (Drug Gene Interaction Database)SUN3
DoCM (Curated mutations)SUN3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SUN3 (select a term)
intoGenSUN3
Cancer3DSUN3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenSUN3
Genetic Testing Registry SUN3
NextProtQ8TAQ9 [Medical]
TSGene256979
GENETestsSUN3
Target ValidationSUN3
Huge Navigator SUN3 [HugePedia]
snp3D : Map Gene to Disease256979
BioCentury BCIQSUN3
ClinGenSUN3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD256979
Chemical/Pharm GKB GenePA165618375
Clinical trialSUN3
Miscellaneous
canSAR (ICR)SUN3 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSUN3
EVEXSUN3
GoPubMedSUN3
iHOPSUN3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:40:46 CEST 2017

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