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SUOX (sulfite oxidase)

Identity

Other alias-
HGNC (Hugo) SUOX
LocusID (NCBI) 6821
Atlas_Id 53894
Location 12q13.2  [Link to chromosome band 12q13]
Location_base_pair Starts at 55997259 and ends at 56005525 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SUOX (12q13.2) / SUOX (12q13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SUOX   11460
Cards
Entrez_Gene (NCBI)SUOX  6821  sulfite oxidase
Aliases
GeneCards (Weizmann)SUOX
Ensembl hg19 (Hinxton)ENSG00000139531 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000139531 [Gene_View]  chr12:55997259-56005525 [Contig_View]  SUOX [Vega]
ICGC DataPortalENSG00000139531
TCGA cBioPortalSUOX
AceView (NCBI)SUOX
Genatlas (Paris)SUOX
WikiGenes6821
SOURCE (Princeton)SUOX
Genetics Home Reference (NIH)SUOX
Genomic and cartography
GoldenPath hg38 (UCSC)SUOX  -     chr12:55997259-56005525 +  12q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SUOX  -     12q13.2   [Description]    (hg19-Feb_2009)
EnsemblSUOX - 12q13.2 [CytoView hg19]  SUOX - 12q13.2 [CytoView hg38]
Mapping of homologs : NCBISUOX [Mapview hg19]  SUOX [Mapview hg38]
OMIM272300   606887   
Gene and transcription
Genbank (Entrez)AK309669 AK312763 AU121557 AU126450 BC065193
RefSeq transcript (Entrez)NM_000456 NM_001032386 NM_001032387
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SUOX
Cluster EST : UnigeneHs.558403 [ NCBI ]
CGAP (NCI)Hs.558403
Alternative Splicing GalleryENSG00000139531
Gene ExpressionSUOX [ NCBI-GEO ]   SUOX [ EBI - ARRAY_EXPRESS ]   SUOX [ SEEK ]   SUOX [ MEM ]
Gene Expression Viewer (FireBrowse)SUOX [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6821
GTEX Portal (Tissue expression)SUOX
Protein : pattern, domain, 3D structure
UniProt/SwissProtP51687   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP51687  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP51687
Splice isoforms : SwissVarP51687
Catalytic activity : Enzyme1.8.3.1 [ Enzyme-Expasy ]   1.8.3.11.8.3.1 [ IntEnz-EBI ]   1.8.3.1 [ BRENDA ]   1.8.3.1 [ KEGG ]   
PhosPhoSitePlusP51687
Domaine pattern : Prosite (Expaxy)CYTOCHROME_B5_1 (PS00191)    CYTOCHROME_B5_2 (PS50255)    MOLYBDOPTERIN_EUK (PS00559)   
Domains : Interpro (EBI)Cyt_B5-like_heme/steroid-bd    Cyt_B5_heme-BS    Ig_E-set    MoCF_OxRdtse_dimer    Mopterin_OxRdtase_euk    OxRdtase_Mopterin-bd_dom    OxRdtase_Mopterin_BS   
Domain families : Pfam (Sanger)Cyt-b5 (PF00173)    Mo-co_dimer (PF03404)    Oxidored_molyb (PF00174)   
Domain families : Pfam (NCBI)pfam00173    pfam03404    pfam00174   
Domain families : Smart (EMBL)Cyt-b5 (SM01117)  
Conserved Domain (NCBI)SUOX
DMDM Disease mutations6821
Blocks (Seattle)SUOX
PDB (SRS)1MJ4   
PDB (PDBSum)1MJ4   
PDB (IMB)1MJ4   
PDB (RSDB)1MJ4   
Structural Biology KnowledgeBase1MJ4   
SCOP (Structural Classification of Proteins)1MJ4   
CATH (Classification of proteins structures)1MJ4   
SuperfamilyP51687
Human Protein AtlasENSG00000139531
Peptide AtlasP51687
HPRD06055
IPIIPI00745906   IPI01022759   IPI01022784   IPI01022348   IPI01021303   
Protein Interaction databases
DIP (DOE-UCLA)P51687
IntAct (EBI)P51687
FunCoupENSG00000139531
BioGRIDSUOX
STRING (EMBL)SUOX
ZODIACSUOX
Ontologies - Pathways
QuickGOP51687
Ontology : AmiGOprotein binding  mitochondrial intermembrane space  mitochondrial matrix  sulfite oxidase activity  heme binding  molybdenum ion binding  nitrate assimilation  molybdopterin cofactor binding  sulfide oxidation, using sulfide:quinone oxidoreductase  
Ontology : EGO-EBIprotein binding  mitochondrial intermembrane space  mitochondrial matrix  sulfite oxidase activity  heme binding  molybdenum ion binding  nitrate assimilation  molybdopterin cofactor binding  sulfide oxidation, using sulfide:quinone oxidoreductase  
Pathways : KEGGSulfur metabolism   
NDEx NetworkSUOX
Atlas of Cancer Signalling NetworkSUOX
Wikipedia pathwaysSUOX
Orthology - Evolution
OrthoDB6821
GeneTree (enSembl)ENSG00000139531
Phylogenetic Trees/Animal Genes : TreeFamSUOX
HOVERGENP51687
HOGENOMP51687
Homologs : HomoloGeneSUOX
Homology/Alignments : Family Browser (UCSC)SUOX
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSUOX [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SUOX
dbVarSUOX
ClinVarSUOX
1000_GenomesSUOX 
Exome Variant ServerSUOX
ExAC (Exome Aggregation Consortium)SUOX (select the gene name)
Genetic variants : HAPMAP6821
Genomic Variants (DGV)SUOX [DGVbeta]
DECIPHERSUOX [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSUOX 
Mutations
ICGC Data PortalSUOX 
TCGA Data PortalSUOX 
Broad Tumor PortalSUOX
OASIS PortalSUOX [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSUOX  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSUOX
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch SUOX
DgiDB (Drug Gene Interaction Database)SUOX
DoCM (Curated mutations)SUOX (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SUOX (select a term)
intoGenSUOX
Cancer3DSUOX(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM272300    606887   
Orphanet14304   
MedgenSUOX
Genetic Testing Registry SUOX
NextProtP51687 [Medical]
TSGene6821
GENETestsSUOX
Target ValidationSUOX
Huge Navigator SUOX [HugePedia]
snp3D : Map Gene to Disease6821
BioCentury BCIQSUOX
ClinGenSUOX
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6821
Chemical/Pharm GKB GenePA36250
Clinical trialSUOX
Miscellaneous
canSAR (ICR)SUOX (select the gene name)
Probes
Litterature
PubMed40 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSUOX
EVEXSUOX
GoPubMedSUOX
iHOPSUOX
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 14:08:58 CEST 2017

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