Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SYS1-DBNDD2 (SYS1-DBNDD2 readthrough (NMD candidate))

Identity

Alias_namesSYS1-DBNDD2 readthrough (non-protein coding)
Other aliasC20orf169-DBNDD2
HGNC (Hugo) SYS1-DBNDD2
LocusID (NCBI) 767557
Atlas_Id 74429
Location 20q13.12  [Link to chromosome band 20q13]
Location_base_pair Starts at 45363169 and ends at 45410610 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SYS1-DBNDD2   33535
Cards
Entrez_Gene (NCBI)SYS1-DBNDD2  767557  SYS1-DBNDD2 readthrough (NMD candidate)
AliasesC20orf169-DBNDD2
GeneCards (Weizmann)SYS1-DBNDD2
Ensembl hg19 (Hinxton)ENSG00000254806 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000254806 [Gene_View]  chr20:45363169-45410610 [Contig_View]  SYS1-DBNDD2 [Vega]
ICGC DataPortalENSG00000254806
TCGA cBioPortalSYS1-DBNDD2
AceView (NCBI)SYS1-DBNDD2
Genatlas (Paris)SYS1-DBNDD2
WikiGenes767557
SOURCE (Princeton)SYS1-DBNDD2
Genetics Home Reference (NIH)SYS1-DBNDD2
Genomic and cartography
GoldenPath hg38 (UCSC)SYS1-DBNDD2  -     chr20:45363169-45410610 +  20q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SYS1-DBNDD2  -     20q13.12   [Description]    (hg19-Feb_2009)
EnsemblSYS1-DBNDD2 - 20q13.12 [CytoView hg19]  SYS1-DBNDD2 - 20q13.12 [CytoView hg38]
Mapping of homologs : NCBISYS1-DBNDD2 [Mapview hg19]  SYS1-DBNDD2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC023562 BI199175 DN994280
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SYS1-DBNDD2
Cluster EST : UnigeneHs.730643 [ NCBI ]
CGAP (NCI)Hs.730643
Alternative Splicing GalleryENSG00000254806
Gene ExpressionSYS1-DBNDD2 [ NCBI-GEO ]   SYS1-DBNDD2 [ EBI - ARRAY_EXPRESS ]   SYS1-DBNDD2 [ SEEK ]   SYS1-DBNDD2 [ MEM ]
Gene Expression Viewer (FireBrowse)SYS1-DBNDD2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)767557
GTEX Portal (Tissue expression)SYS1-DBNDD2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SYS1-DBNDD2
DMDM Disease mutations767557
Blocks (Seattle)SYS1-DBNDD2
Human Protein AtlasENSG00000254806
Protein Interaction databases
FunCoupENSG00000254806
BioGRIDSYS1-DBNDD2
STRING (EMBL)SYS1-DBNDD2
ZODIACSYS1-DBNDD2
Ontologies - Pathways
Huge Navigator SYS1-DBNDD2 [HugePedia]
snp3D : Map Gene to Disease767557
BioCentury BCIQSYS1-DBNDD2
ClinGenSYS1-DBNDD2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD767557
Chemical/Pharm GKB GenePA162405132
Clinical trialSYS1-DBNDD2
Miscellaneous
canSAR (ICR)SYS1-DBNDD2 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSYS1-DBNDD2
EVEXSYS1-DBNDD2
GoPubMedSYS1-DBNDD2
iHOPSYS1-DBNDD2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:40:52 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.