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SYTL2 (synaptotagmin like 2)

Identity

Alias (NCBI)CHR11SYT
EXO4
PPP1R151
SGA72M
SLP2
SLP2A
HGNC (Hugo) SYTL2
HGNC Alias symbFLJ20163
FLJ21219
KIAA1597
exophilin-4
CHR11SYT
SLP2
SGA72M
MGC102768
PPP1R151
HGNC Alias namechromosome 11 synaptotagmin
 breast cancer-associated antigen SGA-72M
 protein phosphatase 1, regulatory subunit 151
LocusID (NCBI) 54843
Atlas_Id 50549
Location 11q14.1  [Link to chromosome band 11q14]
Location_base_pair Starts at 85694221 and ends at 85719350 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
SORL1 (11q24.1) / SYTL2 (11q14.1)SYTL2 (11q14.1) / CHRM1 (11q12.3)SYTL2 (11q14.1) / DOK5 (20q13.2)
SYTL2 (11q14.1) / PICALM (11q14.2)SYTL2 (11q14.1) / SYTL2 (11q14.1)SYTL2 (11q14.1) / TMEM135 (11q14.2)
ZNF782 (9q22.33) / SYTL2 (11q14.1)SORL1 11q24.1 / SYTL2 11q14.1SYTL2 11q14.1 / CHRM1 11q12.3
SYTL2 11q14.1 / DOK5 20q13.2SYTL2 11q14.1 / TMEM135 11q14.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)SYTL2   15585
Cards
Entrez_Gene (NCBI)SYTL2    synaptotagmin like 2
AliasesCHR11SYT; EXO4; PPP1R151; SGA72M; 
SLP2; SLP2A
GeneCards (Weizmann)SYTL2
Ensembl hg19 (Hinxton)ENSG00000137501 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000137501 [Gene_View]  ENSG00000137501 [Sequence]  chr11:85694221-85719350 [Contig_View]  SYTL2 [Vega]
ICGC DataPortalENSG00000137501
TCGA cBioPortalSYTL2
AceView (NCBI)SYTL2
Genatlas (Paris)SYTL2
SOURCE (Princeton)SYTL2
Genetics Home Reference (NIH)SYTL2
Genomic and cartography
GoldenPath hg38 (UCSC)SYTL2  -     chr11:85694221-85719350 -  11q14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SYTL2  -     11q14.1   [Description]    (hg19-Feb_2009)
GoldenPathSYTL2 - 11q14.1 [CytoView hg19]  SYTL2 - 11q14.1 [CytoView hg38]
ImmunoBaseENSG00000137501
Genome Data Viewer NCBISYTL2 [Mapview hg19]  
OMIM612880   
Gene and transcription
Genbank (Entrez)AB046817 AI928445 AJ303364 AK000170 AK024872
RefSeq transcript (Entrez)NM_001162951 NM_001162952 NM_001162953 NM_001289608 NM_001289609 NM_001289610 NM_001365826 NM_001365827 NM_001365828 NM_001365829 NM_001365830 NM_001365831 NM_001365832 NM_001365833 NM_001365834 NM_001365835 NM_001394447 NM_001394448 NM_001394449 NM_001394450 NM_001394451 NM_001394452 NM_001394453 NM_001394454 NM_001394455 NM_001394456 NM_001394457 NM_001394458 NM_001394459 NM_001394460 NM_001394461 NM_001394462 NM_001394464 NM_001394465 NM_001394466 NM_001394467 NM_001394468 NM_001394469 NM_001394470 NM_001394471 NM_001394472 NM_001394473 NM_032379 NM_032943 NM_206927 NM_206928 NM_206929 NM_206930
Consensus coding sequences : CCDS (NCBI)SYTL2
Gene ExpressionSYTL2 [ NCBI-GEO ]   SYTL2 [ EBI - ARRAY_EXPRESS ]   SYTL2 [ SEEK ]   SYTL2 [ MEM ]
Gene Expression Viewer (FireBrowse)SYTL2 [ Firebrowse - Broad ]
GenevisibleExpression of SYTL2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54843
GTEX Portal (Tissue expression)SYTL2
Human Protein AtlasENSG00000137501-SYTL2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SYTL2
Human Protein Atlas [tissue]ENSG00000137501-SYTL2 [tissue]
HPRD10260
Protein Interaction databases
BioGRIDSYTL2
STRING (EMBL)SYTL2
ZODIACSYTL2
Ontologies - Pathways
Litterature
PubMed43 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSYTL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:34:06 CEST 2021
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