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SYTL2 (synaptotagmin like 2)

Identity

Alias (NCBI)CHR11SYT
EXO4
PPP1R151
SGA72M
SLP2
SLP2A
HGNC (Hugo) SYTL2
HGNC Alias symbFLJ20163
FLJ21219
KIAA1597
exophilin-4
CHR11SYT
SLP2
SGA72M
MGC102768
PPP1R151
HGNC Alias namechromosome 11 synaptotagmin
 breast cancer-associated antigen SGA-72M
 protein phosphatase 1, regulatory subunit 151
LocusID (NCBI) 54843
Atlas_Id 50549
Location 11q14.1  [Link to chromosome band 11q14]
Location_base_pair Starts at 85694221 and ends at 85719350 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
SORL1 (11q24.1) / SYTL2 (11q14.1)SYTL2 (11q14.1) / CHRM1 (11q12.3)SYTL2 (11q14.1) / DOK5 (20q13.2)
SYTL2 (11q14.1) / PICALM (11q14.2)SYTL2 (11q14.1) / SYTL2 (11q14.1)SYTL2 (11q14.1) / TMEM135 (11q14.2)
ZNF782 (9q22.33) / SYTL2 (11q14.1)SORL1 11q24.1 / SYTL2 11q14.1SYTL2 11q14.1 / CHRM1 11q12.3
SYTL2 11q14.1 / DOK5 20q13.2SYTL2 11q14.1 / TMEM135 11q14.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)SYTL2   15585
Cards
Entrez_Gene (NCBI)SYTL2    synaptotagmin like 2
AliasesCHR11SYT; EXO4; PPP1R151; SGA72M; 
SLP2; SLP2A
GeneCards (Weizmann)SYTL2
Ensembl hg19 (Hinxton)ENSG00000137501 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000137501 [Gene_View]  ENSG00000137501 [Sequence]  chr11:85694221-85719350 [Contig_View]  SYTL2 [Vega]
ICGC DataPortalENSG00000137501
TCGA cBioPortalSYTL2
AceView (NCBI)SYTL2
Genatlas (Paris)SYTL2
SOURCE (Princeton)SYTL2
Genetics Home Reference (NIH)SYTL2
Genomic and cartography
GoldenPath hg38 (UCSC)SYTL2  -     chr11:85694221-85719350 -  11q14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SYTL2  -     11q14.1   [Description]    (hg19-Feb_2009)
GoldenPathSYTL2 - 11q14.1 [CytoView hg19]  SYTL2 - 11q14.1 [CytoView hg38]
ImmunoBaseENSG00000137501
Genome Data Viewer NCBISYTL2 [Mapview hg19]  
OMIM612880   
Gene and transcription
Genbank (Entrez)AB046817 AI928445 AJ303364 AK000170 AK024872
RefSeq transcript (Entrez)NM_001162951 NM_001162952 NM_001162953 NM_001289608 NM_001289609 NM_001289610 NM_001365826 NM_001365827 NM_001365828 NM_001365829 NM_001365830 NM_001365831 NM_001365832 NM_001365833 NM_001365834 NM_001365835 NM_001394447 NM_001394448 NM_001394449 NM_001394450 NM_001394451 NM_001394452 NM_001394453 NM_001394454 NM_001394455 NM_001394456 NM_001394457 NM_001394458 NM_001394459 NM_001394460 NM_001394461 NM_001394462 NM_001394464 NM_001394465 NM_001394466 NM_001394467 NM_001394468 NM_001394469 NM_001394470 NM_001394471 NM_001394472 NM_001394473 NM_032379 NM_032943 NM_206927 NM_206928 NM_206929 NM_206930
Consensus coding sequences : CCDS (NCBI)SYTL2
Gene ExpressionSYTL2 [ NCBI-GEO ]   SYTL2 [ EBI - ARRAY_EXPRESS ]   SYTL2 [ SEEK ]   SYTL2 [ MEM ]
Gene Expression Viewer (FireBrowse)SYTL2 [ Firebrowse - Broad ]
GenevisibleExpression of SYTL2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54843
GTEX Portal (Tissue expression)SYTL2
Human Protein AtlasENSG00000137501-SYTL2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SYTL2
Human Protein Atlas [tissue]ENSG00000137501-SYTL2 [tissue]
HPRD10260
Protein Interaction databases
BioGRIDSYTL2
STRING (EMBL)SYTL2
ZODIACSYTL2
Ontologies - Pathways
Litterature
PubMed43 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSYTL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:34:06 CEST 2021

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