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TAAR5 (trace amine associated receptor 5)

Identity

Alias (NCBI)PNR
taR-5
HGNC (Hugo) TAAR5
HGNC Alias symbPNR
LocusID (NCBI) 9038
Atlas_Id 74451
Location 6q23.2  [Link to chromosome band 6q23]
Location_base_pair Starts at 132588592 and ends at 132589738 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TAAR5   30236
Cards
Entrez_Gene (NCBI)TAAR5    trace amine associated receptor 5
AliasesPNR; taR-5
GeneCards (Weizmann)TAAR5
Ensembl hg19 (Hinxton)ENSG00000135569 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000135569 [Gene_View]  ENSG00000135569 [Sequence]  chr6:132588592-132589738 [Contig_View]  TAAR5 [Vega]
ICGC DataPortalENSG00000135569
TCGA cBioPortalTAAR5
AceView (NCBI)TAAR5
Genatlas (Paris)TAAR5
SOURCE (Princeton)TAAR5
Genetics Home Reference (NIH)TAAR5
Genomic and cartography
GoldenPath hg38 (UCSC)TAAR5  -     chr6:132588592-132589738 -  6q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAAR5  -     6q23.2   [Description]    (hg19-Feb_2009)
GoldenPathTAAR5 - 6q23.2 [CytoView hg19]  TAAR5 - 6q23.2 [CytoView hg38]
ImmunoBaseENSG00000135569
Genome Data Viewer NCBITAAR5 [Mapview hg19]  
OMIM607405   
Gene and transcription
Genbank (Entrez)AF021818 BC069171 BC095541 BC112209 BC112211
RefSeq transcript (Entrez)NM_001389527 NM_003967
Consensus coding sequences : CCDS (NCBI)TAAR5
Gene ExpressionTAAR5 [ NCBI-GEO ]   TAAR5 [ EBI - ARRAY_EXPRESS ]   TAAR5 [ SEEK ]   TAAR5 [ MEM ]
Gene Expression Viewer (FireBrowse)TAAR5 [ Firebrowse - Broad ]
GenevisibleExpression of TAAR5 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9038
GTEX Portal (Tissue expression)TAAR5
Human Protein AtlasENSG00000135569-TAAR5 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO14804   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO14804  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO14804
PhosPhoSitePlusO14804
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    TAAR_fam   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Domain families : Smart (EMBL)7TM_GPCR_Srsx (SM01381)  
Conserved Domain (NCBI)TAAR5
SuperfamilyO14804
AlphaFold pdb e-kbO14804   
Human Protein Atlas [tissue]ENSG00000135569-TAAR5 [tissue]
HPRD08459
Protein Interaction databases
DIP (DOE-UCLA)O14804
IntAct (EBI)O14804
BioGRIDTAAR5
STRING (EMBL)TAAR5
ZODIACTAAR5
Ontologies - Pathways
QuickGOO14804
Ontology : AmiGOtrace-amine receptor activity  G protein-coupled receptor activity  integral component of plasma membrane  signal transduction  G protein-coupled receptor signaling pathway  sensory perception of chemical stimulus  trimethylamine receptor activity  
Ontology : EGO-EBItrace-amine receptor activity  G protein-coupled receptor activity  integral component of plasma membrane  signal transduction  G protein-coupled receptor signaling pathway  sensory perception of chemical stimulus  trimethylamine receptor activity  
Pathways : KEGGNeuroactive ligand-receptor interaction   
NDEx NetworkTAAR5
Atlas of Cancer Signalling NetworkTAAR5
Wikipedia pathwaysTAAR5
Orthology - Evolution
OrthoDB9038
GeneTree (enSembl)ENSG00000135569
Phylogenetic Trees/Animal Genes : TreeFamTAAR5
Homologs : HomoloGeneTAAR5
Homology/Alignments : Family Browser (UCSC)TAAR5
Gene fusions - Rearrangements
Fusion : QuiverTAAR5
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAAR5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAAR5
dbVarTAAR5
ClinVarTAAR5
MonarchTAAR5
1000_GenomesTAAR5 
Exome Variant ServerTAAR5
GNOMAD BrowserENSG00000135569
Varsome BrowserTAAR5
ACMGTAAR5 variants
VarityO14804
Genomic Variants (DGV)TAAR5 [DGVbeta]
DECIPHERTAAR5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTAAR5 
Mutations
ICGC Data PortalTAAR5 
TCGA Data PortalTAAR5 
Broad Tumor PortalTAAR5
OASIS PortalTAAR5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAAR5  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTAAR5
Mutations and Diseases : HGMDTAAR5
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTAAR5
DgiDB (Drug Gene Interaction Database)TAAR5
DoCM (Curated mutations)TAAR5
CIViC (Clinical Interpretations of Variants in Cancer)TAAR5
Cancer3DTAAR5
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607405   
Orphanet
DisGeNETTAAR5
MedgenTAAR5
Genetic Testing Registry TAAR5
NextProtO14804 [Medical]
GENETestsTAAR5
Target ValidationTAAR5
Huge Navigator TAAR5 [HugePedia]
ClinGenTAAR5
Clinical trials, drugs, therapy
MyCancerGenomeTAAR5
Protein Interactions : CTDTAAR5
Pharm GKB GenePA142670843
PharosO14804
Clinical trialTAAR5
Miscellaneous
canSAR (ICR)TAAR5
HarmonizomeTAAR5
DataMed IndexTAAR5
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTAAR5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:24:44 CEST 2021

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