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TAAR6 (trace amine associated receptor 6)

Identity

Alias (NCBI)TA4
TAR4
TAR6
TRAR4
taR-4
taR-6
HGNC (Hugo) TAAR6
HGNC Alias symbTA4
HGNC Previous nameTRAR4
HGNC Previous nametrace amine receptor 4
LocusID (NCBI) 319100
Atlas_Id 74452
Location 6q23.2  [Link to chromosome band 6q23]
Location_base_pair Starts at 132570322 and ends at 132571359 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TAAR6   20978
Cards
Entrez_Gene (NCBI)TAAR6    trace amine associated receptor 6
AliasesTA4; TAR4; TAR6; TRAR4; 
taR-4; taR-6
GeneCards (Weizmann)TAAR6
Ensembl hg19 (Hinxton)ENSG00000146383 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000146383 [Gene_View]  ENSG00000146383 [Sequence]  chr6:132570322-132571359 [Contig_View]  TAAR6 [Vega]
ICGC DataPortalENSG00000146383
TCGA cBioPortalTAAR6
AceView (NCBI)TAAR6
Genatlas (Paris)TAAR6
SOURCE (Princeton)TAAR6
Genetics Home Reference (NIH)TAAR6
Genomic and cartography
GoldenPath hg38 (UCSC)TAAR6  -     chr6:132570322-132571359 +  6q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAAR6  -     6q23.2   [Description]    (hg19-Feb_2009)
GoldenPathTAAR6 - 6q23.2 [CytoView hg19]  TAAR6 - 6q23.2 [CytoView hg38]
ImmunoBaseENSG00000146383
Genome Data Viewer NCBITAAR6 [Mapview hg19]  
OMIM608923   
Gene and transcription
Genbank (Entrez)AY183470 BC069157
RefSeq transcript (Entrez)NM_175067
Consensus coding sequences : CCDS (NCBI)TAAR6
Gene ExpressionTAAR6 [ NCBI-GEO ]   TAAR6 [ EBI - ARRAY_EXPRESS ]   TAAR6 [ SEEK ]   TAAR6 [ MEM ]
Gene Expression Viewer (FireBrowse)TAAR6 [ Firebrowse - Broad ]
GenevisibleExpression of TAAR6 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)319100
GTEX Portal (Tissue expression)TAAR6
Human Protein AtlasENSG00000146383-TAAR6 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96RI8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96RI8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96RI8
PhosPhoSitePlusQ96RI8
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    TAAR_fam   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Domain families : Smart (EMBL)7TM_GPCR_Srsx (SM01381)  
Conserved Domain (NCBI)TAAR6
SuperfamilyQ96RI8
AlphaFold pdb e-kbQ96RI8   
Human Protein Atlas [tissue]ENSG00000146383-TAAR6 [tissue]
HPRD16404
Protein Interaction databases
DIP (DOE-UCLA)Q96RI8
IntAct (EBI)Q96RI8
BioGRIDTAAR6
STRING (EMBL)TAAR6
ZODIACTAAR6
Ontologies - Pathways
QuickGOQ96RI8
Ontology : AmiGOtrace-amine receptor activity  G protein-coupled receptor activity  plasma membrane  G protein-coupled receptor signaling pathway  integral component of membrane  
Ontology : EGO-EBItrace-amine receptor activity  G protein-coupled receptor activity  plasma membrane  G protein-coupled receptor signaling pathway  integral component of membrane  
Pathways : KEGGNeuroactive ligand-receptor interaction   
NDEx NetworkTAAR6
Atlas of Cancer Signalling NetworkTAAR6
Wikipedia pathwaysTAAR6
Orthology - Evolution
OrthoDB319100
GeneTree (enSembl)ENSG00000146383
Phylogenetic Trees/Animal Genes : TreeFamTAAR6
Homologs : HomoloGeneTAAR6
Homology/Alignments : Family Browser (UCSC)TAAR6
Gene fusions - Rearrangements
Fusion : QuiverTAAR6
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAAR6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAAR6
dbVarTAAR6
ClinVarTAAR6
MonarchTAAR6
1000_GenomesTAAR6 
Exome Variant ServerTAAR6
GNOMAD BrowserENSG00000146383
Varsome BrowserTAAR6
ACMGTAAR6 variants
VarityQ96RI8
Genomic Variants (DGV)TAAR6 [DGVbeta]
DECIPHERTAAR6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTAAR6 
Mutations
ICGC Data PortalTAAR6 
TCGA Data PortalTAAR6 
Broad Tumor PortalTAAR6
OASIS PortalTAAR6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAAR6  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTAAR6
Mutations and Diseases : HGMDTAAR6
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTAAR6
DgiDB (Drug Gene Interaction Database)TAAR6
DoCM (Curated mutations)TAAR6
CIViC (Clinical Interpretations of Variants in Cancer)TAAR6
Cancer3DTAAR6
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608923   
Orphanet
DisGeNETTAAR6
MedgenTAAR6
Genetic Testing Registry TAAR6
NextProtQ96RI8 [Medical]
GENETestsTAAR6
Target ValidationTAAR6
Huge Navigator TAAR6 [HugePedia]
ClinGenTAAR6
Clinical trials, drugs, therapy
MyCancerGenomeTAAR6
Protein Interactions : CTDTAAR6
Pharm GKB GenePA134881141
PharosQ96RI8
Clinical trialTAAR6
Miscellaneous
canSAR (ICR)TAAR6
HarmonizomeTAAR6
DataMed IndexTAAR6
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTAAR6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:24:44 CEST 2021

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