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TAAR8 (trace amine associated receptor 8)

Identity

Alias_namesGPR102
TRAR5
trace amine receptor 5
Alias_symbol (synonym)TA5
TAR5
Other aliasTaR-5
TaR-8
HGNC (Hugo) TAAR8
LocusID (NCBI) 83551
Atlas_Id 74453
Location 6q23.2  [Link to chromosome band 6q23]
Location_base_pair Starts at 132552684 and ends at 132553731 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TAAR8   14964
Cards
Entrez_Gene (NCBI)TAAR8  83551  trace amine associated receptor 8
AliasesGPR102; TA5; TAR5; TRAR5; 
TaR-5; TaR-8
GeneCards (Weizmann)TAAR8
Ensembl hg19 (Hinxton)ENSG00000146385 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000146385 [Gene_View]  ENSG00000146385 [Sequence]  chr6:132552684-132553731 [Contig_View]  TAAR8 [Vega]
ICGC DataPortalENSG00000146385
TCGA cBioPortalTAAR8
AceView (NCBI)TAAR8
Genatlas (Paris)TAAR8
WikiGenes83551
SOURCE (Princeton)TAAR8
Genetics Home Reference (NIH)TAAR8
Genomic and cartography
GoldenPath hg38 (UCSC)TAAR8  -     chr6:132552684-132553731 +  6q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAAR8  -     6q23.2   [Description]    (hg19-Feb_2009)
EnsemblTAAR8 - 6q23.2 [CytoView hg19]  TAAR8 - 6q23.2 [CytoView hg38]
Mapping of homologs : NCBITAAR8 [Mapview hg19]  TAAR8 [Mapview hg38]
OMIM606927   
Gene and transcription
Genbank (Entrez)AY183468 BC069166 CO920393 CO920489
RefSeq transcript (Entrez)NM_053278
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TAAR8
Cluster EST : UnigeneHs.350571 [ NCBI ]
CGAP (NCI)Hs.350571
Alternative Splicing GalleryENSG00000146385
Gene ExpressionTAAR8 [ NCBI-GEO ]   TAAR8 [ EBI - ARRAY_EXPRESS ]   TAAR8 [ SEEK ]   TAAR8 [ MEM ]
Gene Expression Viewer (FireBrowse)TAAR8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)83551
GTEX Portal (Tissue expression)TAAR8
Human Protein AtlasENSG00000146385-TAAR8 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ969N4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ969N4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ969N4
Splice isoforms : SwissVarQ969N4
PhosPhoSitePlusQ969N4
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    TAAR_fam   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Domain families : Smart (EMBL)7TM_GPCR_Srsx (SM01381)  
Conserved Domain (NCBI)TAAR8
DMDM Disease mutations83551
Blocks (Seattle)TAAR8
SuperfamilyQ969N4
Human Protein Atlas [tissue]ENSG00000146385-TAAR8 [tissue]
Peptide AtlasQ969N4
HPRD09496
IPIIPI00056444   
Protein Interaction databases
DIP (DOE-UCLA)Q969N4
IntAct (EBI)Q969N4
FunCoupENSG00000146385
BioGRIDTAAR8
STRING (EMBL)TAAR8
ZODIACTAAR8
Ontologies - Pathways
QuickGOQ969N4
Ontology : AmiGOtrace-amine receptor activity  G-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  
Ontology : EGO-EBItrace-amine receptor activity  G-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  
Pathways : KEGGNeuroactive ligand-receptor interaction   
NDEx NetworkTAAR8
Atlas of Cancer Signalling NetworkTAAR8
Wikipedia pathwaysTAAR8
Orthology - Evolution
OrthoDB83551
GeneTree (enSembl)ENSG00000146385
Phylogenetic Trees/Animal Genes : TreeFamTAAR8
HOVERGENQ969N4
HOGENOMQ969N4
Homologs : HomoloGeneTAAR8
Homology/Alignments : Family Browser (UCSC)TAAR8
Gene fusions - Rearrangements
Fusion : QuiverTAAR8
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAAR8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAAR8
dbVarTAAR8
ClinVarTAAR8
1000_GenomesTAAR8 
Exome Variant ServerTAAR8
ExAC (Exome Aggregation Consortium)ENSG00000146385
GNOMAD BrowserENSG00000146385
Varsome BrowserTAAR8
Genetic variants : HAPMAP83551
Genomic Variants (DGV)TAAR8 [DGVbeta]
DECIPHERTAAR8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTAAR8 
Mutations
ICGC Data PortalTAAR8 
TCGA Data PortalTAAR8 
Broad Tumor PortalTAAR8
OASIS PortalTAAR8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAAR8  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTAAR8
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TAAR8
DgiDB (Drug Gene Interaction Database)TAAR8
DoCM (Curated mutations)TAAR8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TAAR8 (select a term)
intoGenTAAR8
Cancer3DTAAR8(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606927   
Orphanet
DisGeNETTAAR8
MedgenTAAR8
Genetic Testing Registry TAAR8
NextProtQ969N4 [Medical]
TSGene83551
GENETestsTAAR8
Target ValidationTAAR8
Huge Navigator TAAR8 [HugePedia]
snp3D : Map Gene to Disease83551
BioCentury BCIQTAAR8
ClinGenTAAR8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD83551
Chemical/Pharm GKB GenePA28850
Clinical trialTAAR8
Miscellaneous
canSAR (ICR)TAAR8 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTAAR8
EVEXTAAR8
GoPubMedTAAR8
iHOPTAAR8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:33:56 CEST 2018

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