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TAAR9 (trace amine associated receptor 9)

Identity

Alias (NCBI)TA3
TAR3
TAR9
TRAR3
HGNC (Hugo) TAAR9
HGNC Alias symbTA3
TAR3
HGNC Previous nameTRAR3
HGNC Previous nametrace amine receptor 3
 trace amine associated receptor 9
LocusID (NCBI) 134860
Atlas_Id 74454
Location 6q23.2  [Link to chromosome band 6q23]
Location_base_pair Starts at 132538288 and ends at 132539336 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TAAR9   20977
Cards
Entrez_Gene (NCBI)TAAR9    trace amine associated receptor 9
AliasesTA3; TAR3; TAR9; TRAR3
GeneCards (Weizmann)TAAR9
Ensembl hg19 (Hinxton)ENSG00000237110 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237110 [Gene_View]  ENSG00000237110 [Sequence]  chr6:132538288-132539336 [Contig_View]  TAAR9 [Vega]
ICGC DataPortalENSG00000237110
TCGA cBioPortalTAAR9
AceView (NCBI)TAAR9
Genatlas (Paris)TAAR9
SOURCE (Princeton)TAAR9
Genetics Home Reference (NIH)TAAR9
Genomic and cartography
GoldenPath hg38 (UCSC)TAAR9  -     chr6:132538288-132539336 +  6q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAAR9  -     6q23.2   [Description]    (hg19-Feb_2009)
GoldenPathTAAR9 - 6q23.2 [CytoView hg19]  TAAR9 - 6q23.2 [CytoView hg38]
ImmunoBaseENSG00000237110
Genome Data Viewer NCBITAAR9 [Mapview hg19]  
OMIM608282   
Gene and transcription
Genbank (Entrez)AY183469 BC069083
RefSeq transcript (Entrez)NM_175057
Consensus coding sequences : CCDS (NCBI)TAAR9
Gene ExpressionTAAR9 [ NCBI-GEO ]   TAAR9 [ EBI - ARRAY_EXPRESS ]   TAAR9 [ SEEK ]   TAAR9 [ MEM ]
Gene Expression Viewer (FireBrowse)TAAR9 [ Firebrowse - Broad ]
GenevisibleExpression of TAAR9 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)134860
GTEX Portal (Tissue expression)TAAR9
Human Protein AtlasENSG00000237110-TAAR9 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96RI9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96RI9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96RI9
PhosPhoSitePlusQ96RI9
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    TAAR_fam   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Domain families : Smart (EMBL)7TM_GPCR_Srsx (SM01381)  
Conserved Domain (NCBI)TAAR9
SuperfamilyQ96RI9
AlphaFold pdb e-kbQ96RI9   
Human Protein Atlas [tissue]ENSG00000237110-TAAR9 [tissue]
HPRD16308
Protein Interaction databases
DIP (DOE-UCLA)Q96RI9
IntAct (EBI)Q96RI9
BioGRIDTAAR9
STRING (EMBL)TAAR9
ZODIACTAAR9
Ontologies - Pathways
QuickGOQ96RI9
Ontology : AmiGOtrace-amine receptor activity  G protein-coupled receptor activity  protein binding  plasma membrane  G protein-coupled receptor signaling pathway  integral component of membrane  
Ontology : EGO-EBItrace-amine receptor activity  G protein-coupled receptor activity  protein binding  plasma membrane  G protein-coupled receptor signaling pathway  integral component of membrane  
Pathways : KEGGNeuroactive ligand-receptor interaction   
NDEx NetworkTAAR9
Atlas of Cancer Signalling NetworkTAAR9
Wikipedia pathwaysTAAR9
Orthology - Evolution
OrthoDB134860
GeneTree (enSembl)ENSG00000237110
Phylogenetic Trees/Animal Genes : TreeFamTAAR9
Homologs : HomoloGeneTAAR9
Homology/Alignments : Family Browser (UCSC)TAAR9
Gene fusions - Rearrangements
Fusion : QuiverTAAR9
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAAR9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAAR9
dbVarTAAR9
ClinVarTAAR9
MonarchTAAR9
1000_GenomesTAAR9 
Exome Variant ServerTAAR9
GNOMAD BrowserENSG00000237110
Varsome BrowserTAAR9
ACMGTAAR9 variants
VarityQ96RI9
Genomic Variants (DGV)TAAR9 [DGVbeta]
DECIPHERTAAR9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTAAR9 
Mutations
ICGC Data PortalTAAR9 
TCGA Data PortalTAAR9 
Broad Tumor PortalTAAR9
OASIS PortalTAAR9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAAR9  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTAAR9
Mutations and Diseases : HGMDTAAR9
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTAAR9
DgiDB (Drug Gene Interaction Database)TAAR9
DoCM (Curated mutations)TAAR9
CIViC (Clinical Interpretations of Variants in Cancer)TAAR9
Cancer3DTAAR9
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608282   
Orphanet
DisGeNETTAAR9
MedgenTAAR9
Genetic Testing Registry TAAR9
NextProtQ96RI9 [Medical]
GENETestsTAAR9
Target ValidationTAAR9
Huge Navigator TAAR9 [HugePedia]
ClinGenTAAR9
Clinical trials, drugs, therapy
MyCancerGenomeTAAR9
Protein Interactions : CTDTAAR9
Pharm GKB GenePA134931528
PharosQ96RI9
Clinical trialTAAR9
Miscellaneous
canSAR (ICR)TAAR9
HarmonizomeTAAR9
DataMed IndexTAAR9
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTAAR9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:24:45 CEST 2021

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