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TAB3-AS1 (TAB3 antisense RNA 1)

Identity

Alias_namesCXorf29
chromosome X open reading frame 29
TAB3 antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)OTTHUMG00000021331
Other alias
HGNC (Hugo) TAB3-AS1
LocusID (NCBI) 727682
Atlas_Id 46935
Location Xp21.2  [Link to chromosome band Xp21]
Location_base_pair Starts at 30834623 and ends at 30839073 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TAB3-AS1   20176
Cards
Entrez_Gene (NCBI)TAB3-AS1  727682  TAB3 antisense RNA 1
AliasesCXorf29
GeneCards (Weizmann)TAB3-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:30834623-30839073 [Contig_View]  TAB3-AS1 [Vega]
TCGA cBioPortalTAB3-AS1
AceView (NCBI)TAB3-AS1
Genatlas (Paris)TAB3-AS1
WikiGenes727682
SOURCE (Princeton)TAB3-AS1
Genetics Home Reference (NIH)TAB3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)TAB3-AS1  -     chrX:30834623-30839073 +  Xp21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAB3-AS1  -     Xp21.2   [Description]    (hg19-Feb_2009)
EnsemblTAB3-AS1 - Xp21.2 [CytoView hg19]  TAB3-AS1 - Xp21.2 [CytoView hg38]
Mapping of homologs : NCBITAB3-AS1 [Mapview hg19]  TAB3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW265219
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TAB3-AS1
Gene ExpressionTAB3-AS1 [ NCBI-GEO ]   TAB3-AS1 [ EBI - ARRAY_EXPRESS ]   TAB3-AS1 [ SEEK ]   TAB3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TAB3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)727682
GTEX Portal (Tissue expression)TAB3-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TAB3-AS1
DMDM Disease mutations727682
Blocks (Seattle)TAB3-AS1
Protein Interaction databases
BioGRIDTAB3-AS1
STRING (EMBL)TAB3-AS1
ZODIACTAB3-AS1
Ontologies - Pathways
Huge Navigator TAB3-AS1 [HugePedia]
snp3D : Map Gene to Disease727682
BioCentury BCIQTAB3-AS1
ClinGenTAB3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD727682
Chemical/Pharm GKB GenePA145149069
Clinical trialTAB3-AS1
Miscellaneous
canSAR (ICR)TAB3-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineTAB3-AS1
EVEXTAB3-AS1
GoPubMedTAB3-AS1
iHOPTAB3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:37:32 CET 2017

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