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TACO1 (translational activator of cytochrome c oxidase I)

Identity

Alias (NCBI)CCDC44
MC4DN8
HGNC (Hugo) TACO1
HGNC Previous nameCCDC44
HGNC Previous namecoiled-coil domain containing 44
 translational activator of mitochondrially encoded cytochrome c oxidase I
LocusID (NCBI) 51204
Atlas_Id 74457
Location 17q23.3  [Link to chromosome band 17q23]
Location_base_pair Starts at 63600895 and ends at 63608365 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TACO1 (17q23.3) / TACO1 (17q23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TACO1   24316
Cards
Entrez_Gene (NCBI)TACO1    translational activator of cytochrome c oxidase I
AliasesCCDC44; MC4DN8
GeneCards (Weizmann)TACO1
Ensembl hg19 (Hinxton)ENSG00000136463 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000136463 [Gene_View]  ENSG00000136463 [Sequence]  chr17:63600895-63608365 [Contig_View]  TACO1 [Vega]
ICGC DataPortalENSG00000136463
TCGA cBioPortalTACO1
AceView (NCBI)TACO1
Genatlas (Paris)TACO1
SOURCE (Princeton)TACO1
Genetics Home Reference (NIH)TACO1
Genomic and cartography
GoldenPath hg38 (UCSC)TACO1  -     chr17:63600895-63608365 +  17q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TACO1  -     17q23.3   [Description]    (hg19-Feb_2009)
GoldenPathTACO1 - 17q23.3 [CytoView hg19]  TACO1 - 17q23.3 [CytoView hg38]
ImmunoBaseENSG00000136463
Genome Data Viewer NCBITACO1 [Mapview hg19]  
OMIM612958   619052   
Gene and transcription
Genbank (Entrez)AK094052 AK315375 AL833861 BC005049 BC007744
RefSeq transcript (Entrez)NM_016360
Consensus coding sequences : CCDS (NCBI)TACO1
Gene ExpressionTACO1 [ NCBI-GEO ]   TACO1 [ EBI - ARRAY_EXPRESS ]   TACO1 [ SEEK ]   TACO1 [ MEM ]
Gene Expression Viewer (FireBrowse)TACO1 [ Firebrowse - Broad ]
GenevisibleExpression of TACO1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51204
GTEX Portal (Tissue expression)TACO1
Human Protein AtlasENSG00000136463-TACO1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BSH4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BSH4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BSH4
PhosPhoSitePlusQ9BSH4
Domains : Interpro (EBI)Integrase-like_N    Transcrip_reg_TACO1-like    Transcrip_reg_TACO1-like_dom3    YebC-like   
Domain families : Pfam (Sanger)Transcrip_reg (PF01709)   
Domain families : Pfam (NCBI)pfam01709   
Conserved Domain (NCBI)TACO1
SuperfamilyQ9BSH4
AlphaFold pdb e-kbQ9BSH4   
Human Protein Atlas [tissue]ENSG00000136463-TACO1 [tissue]
HPRD17421
Protein Interaction databases
DIP (DOE-UCLA)Q9BSH4
IntAct (EBI)Q9BSH4
BioGRIDTACO1
STRING (EMBL)TACO1
ZODIACTACO1
Ontologies - Pathways
QuickGOQ9BSH4
Ontology : AmiGOmRNA binding  protein binding  mitochondrion  mitochondrion  rRNA binding  mitochondrial cytochrome c oxidase assembly  motor learning  regulation of mitochondrial translation  mitochondrial ribosome binding  regulation of cytochrome-c oxidase activity  
Ontology : EGO-EBImRNA binding  protein binding  mitochondrion  mitochondrion  rRNA binding  mitochondrial cytochrome c oxidase assembly  motor learning  regulation of mitochondrial translation  mitochondrial ribosome binding  regulation of cytochrome-c oxidase activity  
NDEx NetworkTACO1
Atlas of Cancer Signalling NetworkTACO1
Wikipedia pathwaysTACO1
Orthology - Evolution
OrthoDB51204
GeneTree (enSembl)ENSG00000136463
Phylogenetic Trees/Animal Genes : TreeFamTACO1
Homologs : HomoloGeneTACO1
Homology/Alignments : Family Browser (UCSC)TACO1
Gene fusions - Rearrangements
Fusion : QuiverTACO1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTACO1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TACO1
dbVarTACO1
ClinVarTACO1
MonarchTACO1
1000_GenomesTACO1 
Exome Variant ServerTACO1
GNOMAD BrowserENSG00000136463
Varsome BrowserTACO1
ACMGTACO1 variants
VarityQ9BSH4
Genomic Variants (DGV)TACO1 [DGVbeta]
DECIPHERTACO1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTACO1 
Mutations
ICGC Data PortalTACO1 
TCGA Data PortalTACO1 
Broad Tumor PortalTACO1
OASIS PortalTACO1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTACO1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTACO1
Mutations and Diseases : HGMDTACO1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTACO1
DgiDB (Drug Gene Interaction Database)TACO1
DoCM (Curated mutations)TACO1
CIViC (Clinical Interpretations of Variants in Cancer)TACO1
Cancer3DTACO1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612958    619052   
Orphanet19814   
DisGeNETTACO1
MedgenTACO1
Genetic Testing Registry TACO1
NextProtQ9BSH4 [Medical]
GENETestsTACO1
Target ValidationTACO1
Huge Navigator TACO1 [HugePedia]
ClinGenTACO1
Clinical trials, drugs, therapy
MyCancerGenomeTACO1
Protein Interactions : CTDTACO1
Pharm GKB GenePA165433031
PharosQ9BSH4
Clinical trialTACO1
Miscellaneous
canSAR (ICR)TACO1
HarmonizomeTACO1
DataMed IndexTACO1
Probes
Litterature
PubMed29 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTACO1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:24:45 CEST 2021

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