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TACR3 (tachykinin receptor 3)

Identity

Other aliasHH11
NK-3R
NK3R
NKR
TAC3RL
HGNC (Hugo) TACR3
LocusID (NCBI) 6870
Atlas_Id 56826
Location 4q24  [Link to chromosome band 4q24]
Location_base_pair Starts at 103589468 and ends at 103719816 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TACR3   11528
Cards
Entrez_Gene (NCBI)TACR3  6870  tachykinin receptor 3
AliasesHH11; NK-3R; NK3R; NKR; 
TAC3RL
GeneCards (Weizmann)TACR3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:103589468-103719816 [Contig_View]  TACR3 [Vega]
TCGA cBioPortalTACR3
AceView (NCBI)TACR3
Genatlas (Paris)TACR3
WikiGenes6870
SOURCE (Princeton)TACR3
Genetics Home Reference (NIH)TACR3
Genomic and cartography
GoldenPath hg38 (UCSC)TACR3  -     chr4:103589468-103719816 -  4q24   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TACR3  -     4q24   [Description]    (hg19-Feb_2009)
EnsemblTACR3 - 4q24 [CytoView hg19]  TACR3 - 4q24 [CytoView hg38]
Mapping of homologs : NCBITACR3 [Mapview hg19]  TACR3 [Mapview hg38]
OMIM162332   614840   
Gene and transcription
Genbank (Entrez)AY462099 BC095527 BC121806 BC122551 KP769543
RefSeq transcript (Entrez)NM_001059
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TACR3
Cluster EST : UnigeneHs.942 [ NCBI ]
CGAP (NCI)Hs.942
Gene ExpressionTACR3 [ NCBI-GEO ]   TACR3 [ EBI - ARRAY_EXPRESS ]   TACR3 [ SEEK ]   TACR3 [ MEM ]
Gene Expression Viewer (FireBrowse)TACR3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6870
GTEX Portal (Tissue expression)TACR3
Protein : pattern, domain, 3D structure
UniProt/SwissProtP29371   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP29371  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP29371
Splice isoforms : SwissVarP29371
PhosPhoSitePlusP29371
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Neurokn_rcpt    NK3_rcpt   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)TACR3
DMDM Disease mutations6870
Blocks (Seattle)TACR3
SuperfamilyP29371
Peptide AtlasP29371
IPIIPI00021358   
Protein Interaction databases
DIP (DOE-UCLA)P29371
IntAct (EBI)P29371
BioGRIDTACR3
STRING (EMBL)TACR3
ZODIACTACR3
Ontologies - Pathways
QuickGOP29371
Ontology : AmiGOtachykinin receptor activity  protein binding  nucleus  cytoplasm  plasma membrane  integral component of plasma membrane  tachykinin receptor signaling pathway  aging  positive regulation of heart rate  response to estradiol  dendrite membrane  neuronal cell body membrane  regulation of dopamine metabolic process  response to cocaine  hyperosmotic salinity response  response to morphine  positive regulation of blood pressure  regulation of feeding behavior  positive regulation of uterine smooth muscle contraction  
Ontology : EGO-EBItachykinin receptor activity  protein binding  nucleus  cytoplasm  plasma membrane  integral component of plasma membrane  tachykinin receptor signaling pathway  aging  positive regulation of heart rate  response to estradiol  dendrite membrane  neuronal cell body membrane  regulation of dopamine metabolic process  response to cocaine  hyperosmotic salinity response  response to morphine  positive regulation of blood pressure  regulation of feeding behavior  positive regulation of uterine smooth muscle contraction  
Pathways : KEGGCalcium signaling pathway    Neuroactive ligand-receptor interaction   
NDEx NetworkTACR3
Atlas of Cancer Signalling NetworkTACR3
Wikipedia pathwaysTACR3
Orthology - Evolution
OrthoDB6870
Phylogenetic Trees/Animal Genes : TreeFamTACR3
HOVERGENP29371
HOGENOMP29371
Homologs : HomoloGeneTACR3
Homology/Alignments : Family Browser (UCSC)TACR3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTACR3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TACR3
dbVarTACR3
ClinVarTACR3
1000_GenomesTACR3 
Exome Variant ServerTACR3
ExAC (Exome Aggregation Consortium)TACR3 (select the gene name)
Genetic variants : HAPMAP6870
Genomic Variants (DGV)TACR3 [DGVbeta]
DECIPHERTACR3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTACR3 
Mutations
ICGC Data PortalTACR3 
TCGA Data PortalTACR3 
Broad Tumor PortalTACR3
OASIS PortalTACR3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTACR3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTACR3
BioMutasearch TACR3
DgiDB (Drug Gene Interaction Database)TACR3
DoCM (Curated mutations)TACR3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TACR3 (select a term)
intoGenTACR3
Cancer3DTACR3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM162332    614840   
Orphanet
MedgenTACR3
Genetic Testing Registry TACR3
NextProtP29371 [Medical]
TSGene6870
GENETestsTACR3
Target ValidationTACR3
Huge Navigator TACR3 [HugePedia]
snp3D : Map Gene to Disease6870
BioCentury BCIQTACR3
ClinGenTACR3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6870
Chemical/Pharm GKB GenePA36304
Clinical trialTACR3
Miscellaneous
canSAR (ICR)TACR3 (select the gene name)
Probes
Litterature
PubMed50 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTACR3
EVEXTACR3
GoPubMedTACR3
iHOPTACR3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:58:27 CEST 2017

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