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TADA2B (transcriptional adaptor 2B)

Identity

Alias (NCBI)ADA2(beta)
ADA2B
HGNC (Hugo) TADA2B
HGNC Alias symbMGC21874
LocusID (NCBI) 93624
Atlas_Id 74460
Location 4p16.1  [Link to chromosome band 4p16]
Location_base_pair Starts at 7043372 and ends at 7057950 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ACTG1 (17q25.3) / TADA2B (4p16.1)TADA2B (4p16.1) / DPP6 (7q36.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TADA2B   30781
Cards
Entrez_Gene (NCBI)TADA2B    transcriptional adaptor 2B
AliasesADA2(beta); ADA2B
GeneCards (Weizmann)TADA2B
Ensembl hg19 (Hinxton)ENSG00000173011 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000173011 [Gene_View]  ENSG00000173011 [Sequence]  chr4:7043372-7057950 [Contig_View]  TADA2B [Vega]
ICGC DataPortalENSG00000173011
TCGA cBioPortalTADA2B
AceView (NCBI)TADA2B
Genatlas (Paris)TADA2B
SOURCE (Princeton)TADA2B
Genetics Home Reference (NIH)TADA2B
Genomic and cartography
GoldenPath hg38 (UCSC)TADA2B  -     chr4:7043372-7057950 +  4p16.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TADA2B  -     4p16.1   [Description]    (hg19-Feb_2009)
GoldenPathTADA2B - 4p16.1 [CytoView hg19]  TADA2B - 4p16.1 [CytoView hg38]
ImmunoBaseENSG00000173011
Genome Data Viewer NCBITADA2B [Mapview hg19]  
OMIM608790   
Gene and transcription
Genbank (Entrez)AK026299 AK093974 AK096655 AK126966 BC013164
RefSeq transcript (Entrez)NM_152293
Consensus coding sequences : CCDS (NCBI)TADA2B
Gene ExpressionTADA2B [ NCBI-GEO ]   TADA2B [ EBI - ARRAY_EXPRESS ]   TADA2B [ SEEK ]   TADA2B [ MEM ]
Gene Expression Viewer (FireBrowse)TADA2B [ Firebrowse - Broad ]
GenevisibleExpression of TADA2B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)93624
GTEX Portal (Tissue expression)TADA2B
Human Protein AtlasENSG00000173011-TADA2B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86TJ2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86TJ2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86TJ2
PhosPhoSitePlusQ86TJ2
Domaine pattern : Prosite (Expaxy)SANT (PS51293)    ZF_ZZ_1 (PS01357)    ZF_ZZ_2 (PS50135)   
Domains : Interpro (EBI)ADA2-like_ZZ    Ada2/TADA2    Homeobox-like_sf    SANT/Myb    SANT_dom    Znf_ZZ    Znf_ZZ_sf   
Domain families : Pfam (Sanger)Myb_DNA-binding (PF00249)   
Domain families : Pfam (NCBI)pfam00249   
Domain families : Smart (EMBL)SANT (SM00717)  ZnF_ZZ (SM00291)  
Conserved Domain (NCBI)TADA2B
SuperfamilyQ86TJ2
AlphaFold pdb e-kbQ86TJ2   
Human Protein Atlas [tissue]ENSG00000173011-TADA2B [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q86TJ2
IntAct (EBI)Q86TJ2
BioGRIDTADA2B
STRING (EMBL)TADA2B
ZODIACTADA2B
Ontologies - Pathways
QuickGOQ86TJ2
Ontology : AmiGOchromatin binding  transcription coactivator activity  protein binding  nucleus  nucleoplasm  chromatin remodeling  regulation of transcription by RNA polymerase II  zinc ion binding  protein deubiquitination  STAGA complex  positive regulation of histone acetylation  positive regulation of transcription, DNA-templated  SAGA-type complex  SAGA-type complex  
Ontology : EGO-EBIchromatin binding  transcription coactivator activity  protein binding  nucleus  nucleoplasm  chromatin remodeling  regulation of transcription by RNA polymerase II  zinc ion binding  protein deubiquitination  STAGA complex  positive regulation of histone acetylation  positive regulation of transcription, DNA-templated  SAGA-type complex  SAGA-type complex  
NDEx NetworkTADA2B
Atlas of Cancer Signalling NetworkTADA2B
Wikipedia pathwaysTADA2B
Orthology - Evolution
OrthoDB93624
GeneTree (enSembl)ENSG00000173011
Phylogenetic Trees/Animal Genes : TreeFamTADA2B
Homologs : HomoloGeneTADA2B
Homology/Alignments : Family Browser (UCSC)TADA2B
Gene fusions - Rearrangements
Fusion : QuiverTADA2B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTADA2B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TADA2B
dbVarTADA2B
ClinVarTADA2B
MonarchTADA2B
1000_GenomesTADA2B 
Exome Variant ServerTADA2B
GNOMAD BrowserENSG00000173011
Varsome BrowserTADA2B
ACMGTADA2B variants
VarityQ86TJ2
Genomic Variants (DGV)TADA2B [DGVbeta]
DECIPHERTADA2B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTADA2B 
Mutations
ICGC Data PortalTADA2B 
TCGA Data PortalTADA2B 
Broad Tumor PortalTADA2B
OASIS PortalTADA2B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTADA2B  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTADA2B
Mutations and Diseases : HGMDTADA2B
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTADA2B
DgiDB (Drug Gene Interaction Database)TADA2B
DoCM (Curated mutations)TADA2B
CIViC (Clinical Interpretations of Variants in Cancer)TADA2B
Cancer3DTADA2B
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608790   
Orphanet
DisGeNETTADA2B
MedgenTADA2B
Genetic Testing Registry TADA2B
NextProtQ86TJ2 [Medical]
GENETestsTADA2B
Target ValidationTADA2B
Huge Navigator TADA2B [HugePedia]
ClinGenTADA2B
Clinical trials, drugs, therapy
MyCancerGenomeTADA2B
Protein Interactions : CTDTADA2B
Pharm GKB GenePA165664556
PharosQ86TJ2
Clinical trialTADA2B
Miscellaneous
canSAR (ICR)TADA2B
HarmonizomeTADA2B
DataMed IndexTADA2B
Probes
Litterature
PubMed32 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTADA2B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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