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TAGAP (T cell activation RhoGTPase activating protein)

Identity

Alias (NCBI)ARHGAP47
FKSG15
IDDM21
TAGAP1
HGNC (Hugo) TAGAP
HGNC Alias symbFLJ32631
IDDM21
ARHGAP47
HGNC Previous nameT-cell activation GTPase activating protein
LocusID (NCBI) 117289
Atlas_Id 74474
Location 6q25.3  [Link to chromosome band 6q25]
Location_base_pair Starts at 159034469 and ends at 159045152 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TAGAP   15669
Cards
Entrez_Gene (NCBI)TAGAP    T cell activation RhoGTPase activating protein
AliasesARHGAP47; FKSG15; IDDM21; TAGAP1
GeneCards (Weizmann)TAGAP
Ensembl hg19 (Hinxton)ENSG00000164691 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164691 [Gene_View]  ENSG00000164691 [Sequence]  chr6:159034469-159045152 [Contig_View]  TAGAP [Vega]
ICGC DataPortalENSG00000164691
TCGA cBioPortalTAGAP
AceView (NCBI)TAGAP
Genatlas (Paris)TAGAP
SOURCE (Princeton)TAGAP
Genetics Home Reference (NIH)TAGAP
Genomic and cartography
GoldenPath hg38 (UCSC)TAGAP  -     chr6:159034469-159045152 -  6q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAGAP  -     6q25.3   [Description]    (hg19-Feb_2009)
GoldenPathTAGAP - 6q25.3 [CytoView hg19]  TAGAP - 6q25.3 [CytoView hg38]
ImmunoBaseENSG00000164691
Genome Data Viewer NCBITAGAP [Mapview hg19]  
OMIM609667   
Gene and transcription
Genbank (Entrez)AF385429 AF385430 AK025272 AK057193 AK097090
RefSeq transcript (Entrez)NM_001278733 NM_054114 NM_138810 NM_152133
Consensus coding sequences : CCDS (NCBI)TAGAP
Gene ExpressionTAGAP [ NCBI-GEO ]   TAGAP [ EBI - ARRAY_EXPRESS ]   TAGAP [ SEEK ]   TAGAP [ MEM ]
Gene Expression Viewer (FireBrowse)TAGAP [ Firebrowse - Broad ]
GenevisibleExpression of TAGAP in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)117289
GTEX Portal (Tissue expression)TAGAP
Human Protein AtlasENSG00000164691-TAGAP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N103   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N103  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N103
PhosPhoSitePlusQ8N103
Domaine pattern : Prosite (Expaxy)RHOGAP (PS50238)   
Domains : Interpro (EBI)Rho_GTPase_activation_prot    RhoGAP_dom   
Domain families : Pfam (Sanger)RhoGAP (PF00620)   
Domain families : Pfam (NCBI)pfam00620   
Domain families : Smart (EMBL)RhoGAP (SM00324)  
Conserved Domain (NCBI)TAGAP
SuperfamilyQ8N103
AlphaFold pdb e-kbQ8N103   
Human Protein Atlas [tissue]ENSG00000164691-TAGAP [tissue]
HPRD18143
Protein Interaction databases
DIP (DOE-UCLA)Q8N103
IntAct (EBI)Q8N103
BioGRIDTAGAP
STRING (EMBL)TAGAP
ZODIACTAGAP
Ontologies - Pathways
QuickGOQ8N103
Ontology : AmiGOguanyl-nucleotide exchange factor activity  GTPase activator activity  protein binding  cytosol  signal transduction  regulation of catalytic activity  regulation of small GTPase mediated signal transduction  
Ontology : EGO-EBIguanyl-nucleotide exchange factor activity  GTPase activator activity  protein binding  cytosol  signal transduction  regulation of catalytic activity  regulation of small GTPase mediated signal transduction  
NDEx NetworkTAGAP
Atlas of Cancer Signalling NetworkTAGAP
Wikipedia pathwaysTAGAP
Orthology - Evolution
OrthoDB117289
GeneTree (enSembl)ENSG00000164691
Phylogenetic Trees/Animal Genes : TreeFamTAGAP
Homologs : HomoloGeneTAGAP
Homology/Alignments : Family Browser (UCSC)TAGAP
Gene fusions - Rearrangements
Fusion : QuiverTAGAP
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAGAP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAGAP
dbVarTAGAP
ClinVarTAGAP
MonarchTAGAP
1000_GenomesTAGAP 
Exome Variant ServerTAGAP
GNOMAD BrowserENSG00000164691
Varsome BrowserTAGAP
ACMGTAGAP variants
VarityQ8N103
Genomic Variants (DGV)TAGAP [DGVbeta]
DECIPHERTAGAP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTAGAP 
Mutations
ICGC Data PortalTAGAP 
TCGA Data PortalTAGAP 
Broad Tumor PortalTAGAP
OASIS PortalTAGAP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAGAP  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTAGAP
Mutations and Diseases : HGMDTAGAP
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTAGAP
DgiDB (Drug Gene Interaction Database)TAGAP
DoCM (Curated mutations)TAGAP
CIViC (Clinical Interpretations of Variants in Cancer)TAGAP
Cancer3DTAGAP
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609667   
Orphanet
DisGeNETTAGAP
MedgenTAGAP
Genetic Testing Registry TAGAP
NextProtQ8N103 [Medical]
GENETestsTAGAP
Target ValidationTAGAP
Huge Navigator TAGAP [HugePedia]
ClinGenTAGAP
Clinical trials, drugs, therapy
MyCancerGenomeTAGAP
Protein Interactions : CTDTAGAP
Pharm GKB GenePA38016
PharosQ8N103
Clinical trialTAGAP
Miscellaneous
canSAR (ICR)TAGAP
HarmonizomeTAGAP
DataMed IndexTAGAP
Probes
Litterature
PubMed40 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTAGAP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:24:49 CEST 2021

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